==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DE NOVO PROTEIN 10-FEB-05 1YT6 . COMPND 2 MOLECULE: PEPTIDE SD; . SOURCE 2 SYNTHETIC: YES; . AUTHOR T.MURATA,H.HEMMI,S.NAKAMURA,K.SHIMIZU,Y.SUZUKI,I.YAMAGUCHI . 10 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1092.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 30.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 144 0, 0.0 9,-0.1 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 114.3 2.9 5.0 2.7 2 2 A a - 0 0 56 6,-0.1 5,-0.3 1,-0.1 6,-0.2 0.128 360.0-114.3 -35.8 151.2 1.3 1.6 2.0 3 3 A L - 0 0 85 3,-1.4 3,-0.5 4,-0.7 -1,-0.1 -0.662 11.7-124.8 -96.1 151.8 -1.3 1.5 -0.7 4 4 A P S S+ 0 0 122 0, 0.0 3,-0.4 0, 0.0 -1,-0.1 0.948 114.8 27.5 -57.3 -53.4 -5.1 0.7 -0.1 5 5 A W S S+ 0 0 193 1,-0.2 -3,-0.0 2,-0.1 -2,-0.0 0.303 140.8 27.9 -92.4 8.4 -5.2 -2.1 -2.6 6 6 A S + 0 0 65 -3,-0.5 -3,-1.4 1,-0.0 -1,-0.2 -0.244 66.3 168.1-166.0 63.5 -1.5 -2.9 -2.1 7 7 A D + 0 0 106 -3,-0.4 -4,-0.7 -5,-0.3 -2,-0.1 0.948 22.8 162.1 -44.9 -71.0 -0.3 -1.9 1.4 8 8 A G - 0 0 40 -6,-0.2 2,-1.3 -5,-0.1 -6,-0.1 -0.403 55.7 -3.2 80.9-159.7 3.1 -3.6 1.2 9 9 A P 0 0 134 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.536 360.0 360.0 -72.1 94.0 6.0 -2.9 3.5 10 10 A a 0 0 147 -2,-1.3 -7,-0.0 -9,-0.1 -2,-0.0 0.246 360.0 360.0 -67.4 360.0 4.7 0.0 5.6