==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 05-APR-07 2YTC . COMPND 2 MOLECULE: PRE-MRNA-SPLICING FACTOR RBM22; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.KASAHARA,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5689.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 68.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 23.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 11.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 21.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 227 A G 0 0 140 0, 0.0 2,-0.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-150.2 -20.9 15.3 -1.6 2 228 A S - 0 0 115 1,-0.1 0, 0.0 3,-0.0 0, 0.0 -0.825 360.0-133.4-112.3 150.8 -17.8 14.3 0.4 3 229 A S - 0 0 123 -2,-0.3 -1,-0.1 2,-0.0 0, 0.0 0.924 43.6-138.5 -65.3 -45.9 -16.9 14.9 4.0 4 230 A G - 0 0 59 1,-0.1 2,-0.3 -3,-0.1 0, 0.0 0.696 23.8-171.0 86.2 112.8 -13.4 16.0 3.2 5 231 A S - 0 0 106 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 -0.937 17.9-150.0-134.9 156.9 -10.4 14.9 5.3 6 232 A S - 0 0 124 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.813 20.3-171.5-131.2 92.5 -6.7 15.8 5.5 7 233 A G - 0 0 60 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 0.260 41.4 -91.6 -64.4-163.0 -4.5 13.0 6.7 8 234 A E S S+ 0 0 128 75,-0.1 2,-0.7 2,-0.0 -1,-0.1 -0.235 84.3 117.5-110.0 42.3 -0.8 13.3 7.5 9 235 A D + 0 0 33 1,-0.2 -2,-0.1 2,-0.1 76,-0.1 -0.879 20.6 146.9-114.8 100.4 0.6 12.4 4.1 10 236 A K S S- 0 0 152 -2,-0.7 -1,-0.2 1,-0.0 -3,-0.0 0.906 85.8 -5.6 -93.4 -66.9 2.5 15.3 2.5 11 237 A T S S+ 0 0 125 47,-0.0 2,-0.5 0, 0.0 47,-0.1 -0.040 94.0 136.3-120.9 29.2 5.3 13.7 0.4 12 238 A I + 0 0 23 1,-0.1 -3,-0.0 72,-0.1 71,-0.0 -0.674 26.1 176.8 -83.1 126.1 4.7 10.1 1.3 13 239 A T + 0 0 29 -2,-0.5 42,-0.4 42,-0.1 2,-0.3 0.536 54.7 94.4-102.4 -11.7 4.8 7.6 -1.6 14 240 A T - 0 0 23 40,-0.2 70,-2.0 26,-0.0 2,-0.4 -0.608 56.6-163.5 -84.8 141.9 4.4 4.5 0.6 15 241 A L E -AB 53 83A 0 38,-2.0 38,-2.5 -2,-0.3 2,-0.2 -0.985 11.4-139.0-130.8 124.4 0.9 3.1 1.1 16 242 A Y E -AB 52 82A 54 66,-3.2 66,-2.1 -2,-0.4 2,-0.4 -0.571 17.4-169.0 -81.5 141.3 -0.1 0.6 3.8 17 243 A V E +AB 51 81A 0 34,-1.5 34,-2.1 -2,-0.2 64,-0.2 -0.958 7.2 177.9-136.3 117.0 -2.4 -2.3 2.9 18 244 A G E +A 50 0A 2 62,-1.8 62,-0.4 -2,-0.4 32,-0.2 -0.546 53.6 55.1-110.1 177.3 -4.0 -4.6 5.5 19 245 A G + 0 0 22 30,-0.5 31,-0.2 29,-0.3 -1,-0.2 0.874 62.7 139.6 68.8 37.8 -6.5 -7.5 5.4 20 246 A L > + 0 0 4 29,-2.5 4,-1.2 -3,-0.2 30,-0.1 0.973 29.0 175.7 -75.9 -59.8 -4.3 -9.5 2.9 21 247 A G T >4 - 0 0 13 2,-0.2 3,-2.5 1,-0.2 25,-0.0 0.422 56.4 -71.5 64.4 149.9 -4.7 -12.9 4.3 22 248 A D T 34 S+ 0 0 135 1,-0.3 -1,-0.2 24,-0.1 24,-0.0 0.819 132.3 68.6 -41.0 -36.9 -3.3 -16.1 2.8 23 249 A T T 34 S+ 0 0 98 2,-0.0 2,-0.3 52,-0.0 -1,-0.3 0.887 99.1 55.0 -51.9 -43.0 -6.0 -15.6 0.1 24 250 A I S << S- 0 0 9 -3,-2.5 2,-0.2 -4,-1.2 -4,-0.0 -0.740 72.8-171.2 -97.1 143.1 -4.1 -12.5 -1.1 25 251 A T > - 0 0 68 -2,-0.3 4,-0.7 1,-0.1 -2,-0.0 -0.616 36.3-101.0-121.6-178.3 -0.5 -12.5 -2.2 26 252 A E H >> S+ 0 0 84 -2,-0.2 4,-2.7 2,-0.2 3,-1.7 0.973 116.7 53.7 -68.9 -56.7 2.2 -10.0 -3.1 27 253 A T H 3> S+ 0 0 89 1,-0.3 4,-2.7 2,-0.2 5,-0.4 0.896 101.8 60.2 -44.0 -50.7 2.0 -10.4 -6.9 28 254 A D H 3> S+ 0 0 62 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.845 114.0 37.6 -47.8 -37.6 -1.7 -9.7 -6.7 29 255 A L H S+ 0 0 0 -3,-1.7 4,-3.1 -4,-0.7 5,-0.5 0.938 109.1 59.1 -80.5 -52.4 -0.9 -6.3 -5.2 30 256 A R H X5S+ 0 0 138 -4,-2.7 4,-2.7 1,-0.2 -2,-0.2 0.862 115.6 38.4 -43.9 -42.9 2.3 -5.5 -7.3 31 257 A N H X5S+ 0 0 88 -4,-2.7 4,-1.5 -5,-0.2 -1,-0.2 0.906 112.3 55.6 -76.5 -44.3 0.1 -5.8 -10.4 32 258 A H H <5S+ 0 0 59 -4,-1.4 -2,-0.2 -5,-0.4 4,-0.2 0.833 123.0 29.2 -57.4 -33.1 -3.0 -4.1 -8.8 33 259 A F H >X5S+ 0 0 0 -4,-3.1 3,-2.5 2,-0.1 4,-1.1 0.830 105.6 72.6 -94.5 -41.4 -0.8 -1.1 -8.0 34 260 A Y H 3< > -C 50 0A 36 5,-2.0 5,-2.3 -2,-0.8 3,-0.9 -0.780 10.0-176.7 -94.5 100.0 4.2 -8.9 6.1 46 272 A Q G > 5S+ 0 0 147 -2,-1.0 3,-2.2 1,-0.3 -1,-0.2 0.904 83.7 61.2 -60.1 -43.2 2.3 -12.2 6.5 47 273 A R G 3 5S+ 0 0 205 1,-0.3 -1,-0.3 -3,-0.1 -2,-0.1 0.776 117.8 31.6 -55.1 -26.5 2.6 -12.0 10.3 48 274 A Q G < 5S- 0 0 99 -3,-0.9 -29,-0.3 2,-0.2 -1,-0.3 0.118 103.6-129.3-117.3 17.8 0.6 -8.8 10.0 49 275 A Q T < 5S+ 0 0 100 -3,-2.2 -29,-2.5 1,-0.1 -30,-0.5 0.822 74.2 110.8 34.2 43.9 -1.4 -9.8 6.9 50 276 A C E < -AC 18 45A 1 -5,-2.3 -5,-2.0 -32,-0.2 2,-0.3 -0.840 51.7-156.8-136.7 173.1 -0.4 -6.4 5.5 51 277 A A E -AC 17 44A 0 -34,-2.1 -34,-1.5 -7,-0.3 2,-0.6 -0.971 12.5-139.6-156.7 138.9 1.9 -5.0 2.7 52 278 A F E -AC 16 43A 70 -9,-2.1 -9,-1.9 -2,-0.3 2,-0.6 -0.890 16.6-160.5-105.4 114.9 3.7 -1.7 2.1 53 279 A I E -AC 15 42A 0 -38,-2.5 -38,-2.0 -2,-0.6 2,-0.4 -0.840 7.7-165.1 -98.1 118.0 3.6 -0.5 -1.5 54 280 A Q E - C 0 41A 51 -13,-2.9 -14,-1.0 -2,-0.6 -13,-0.8 -0.826 1.2-158.9-104.4 140.4 6.2 2.1 -2.4 55 281 A F E - C 0 39A 1 -42,-0.4 -16,-0.2 -2,-0.4 3,-0.1 -0.907 21.1-139.7-119.4 146.4 6.1 4.2 -5.6 56 282 A A S S+ 0 0 54 -18,-0.8 2,-0.5 -2,-0.4 -1,-0.1 0.842 97.1 35.5 -69.3 -34.2 9.0 6.0 -7.3 57 283 A T S >> S- 0 0 85 -19,-0.4 3,-1.3 1,-0.1 4,-1.1 -0.969 76.9-137.0-127.7 118.2 6.7 9.1 -8.0 58 284 A R H 3> S+ 0 0 50 -2,-0.5 4,-3.0 1,-0.3 5,-0.3 0.801 98.1 80.1 -36.7 -37.0 4.1 10.2 -5.5 59 285 A Q H 3> S+ 0 0 146 1,-0.3 4,-1.9 2,-0.2 -1,-0.3 0.899 98.0 36.8 -36.8 -65.7 1.9 10.6 -8.6 60 286 A A H <> S+ 0 0 2 -3,-1.3 4,-2.4 1,-0.2 5,-0.3 0.849 114.8 59.7 -59.1 -35.3 1.1 6.9 -8.8 61 287 A A H X S+ 0 0 0 -4,-1.1 4,-3.0 2,-0.2 -2,-0.2 0.967 106.2 44.3 -57.8 -57.4 1.0 6.9 -5.0 62 288 A E H X S+ 0 0 90 -4,-3.0 4,-2.0 2,-0.2 5,-0.4 0.960 113.7 50.1 -52.3 -59.3 -1.8 9.4 -4.6 63 289 A V H X S+ 0 0 60 -4,-1.9 4,-2.3 -5,-0.3 -1,-0.2 0.934 116.4 40.5 -44.4 -61.6 -3.9 7.9 -7.4 64 290 A A H < S+ 0 0 0 -4,-2.4 4,-0.5 2,-0.2 -1,-0.2 0.869 110.2 63.6 -57.4 -38.4 -3.7 4.4 -5.9 65 291 A A H >X S+ 0 0 1 -4,-3.0 4,-2.8 -5,-0.3 3,-2.1 0.970 109.4 34.6 -49.5 -69.6 -4.1 5.9 -2.4 66 292 A E H 3< S+ 0 0 142 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.897 118.8 53.1 -54.1 -43.4 -7.6 7.2 -2.9 67 293 A K T 3< S+ 0 0 97 -4,-2.3 -1,-0.3 -5,-0.4 -2,-0.2 0.522 116.7 41.4 -70.9 -3.7 -8.4 4.3 -5.2 68 294 A S T X> S+ 0 0 0 -3,-2.1 3,-1.7 -4,-0.5 4,-1.5 0.662 79.0 115.2-112.3 -30.0 -7.2 2.1 -2.3 69 295 A F T 3< S- 0 0 89 -4,-2.8 11,-0.1 1,-0.3 13,-0.1 -0.219 115.9 -43.2 -47.9 97.1 -8.7 4.0 0.7 70 296 A N T 34 S+ 0 0 79 -2,-0.5 -1,-0.3 11,-0.3 10,-0.1 0.756 137.1 88.0 45.2 25.5 -11.1 1.2 1.8 71 297 A K T <4 + 0 0 129 -3,-1.7 2,-1.1 8,-0.2 -2,-0.2 0.584 53.3 97.3-120.6 -25.7 -11.9 0.9 -1.9 72 298 A L < + 0 0 3 -4,-1.5 7,-0.9 7,-0.4 2,-0.7 -0.566 48.9 174.3 -72.5 99.8 -9.2 -1.6 -2.9 73 299 A I E +D 78 0B 78 -2,-1.1 3,-0.4 5,-0.2 2,-0.4 -0.851 3.0 178.1-113.4 96.7 -11.1 -4.9 -2.9 74 300 A V E > +D 77 0B 12 3,-1.0 3,-0.7 -2,-0.7 -50,-0.0 -0.804 66.5 4.8-100.7 138.4 -8.9 -7.8 -4.2 75 301 A N T 3 S- 0 0 92 -2,-0.4 -1,-0.2 1,-0.2 3,-0.1 0.939 128.7 -62.6 58.1 49.9 -10.1 -11.4 -4.4 76 302 A G T 3 S+ 0 0 83 -3,-0.4 2,-0.4 1,-0.1 -1,-0.2 0.813 116.0 115.0 45.8 34.2 -13.6 -10.4 -3.2 77 303 A R E < -D 74 0B 87 -3,-0.7 -3,-1.0 -54,-0.0 -1,-0.1 -0.885 65.4-132.2-138.8 105.1 -12.0 -9.3 0.0 78 304 A R E -D 73 0B 132 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.110 22.5-152.9 -51.7 149.3 -12.0 -5.6 1.0 79 305 A L - 0 0 2 -7,-0.9 2,-1.0 -11,-0.2 -7,-0.4 -0.995 12.6-133.7-133.5 134.9 -8.7 -4.1 2.1 80 306 A N - 0 0 89 -2,-0.4 -62,-1.8 -62,-0.4 2,-0.4 -0.750 29.3-173.9 -89.8 102.2 -8.0 -1.3 4.5 81 307 A V E +B 17 0A 5 -2,-1.0 2,-0.3 -13,-0.7 -11,-0.3 -0.805 7.8 168.7-100.0 136.5 -5.4 1.0 2.8 82 308 A K E -B 16 0A 100 -66,-2.1 -66,-3.2 -2,-0.4 -2,-0.0 -0.997 40.7 -90.3-146.5 147.5 -3.8 3.9 4.6 83 309 A W E -B 15 0A 42 -2,-0.3 -68,-0.2 -68,-0.2 -75,-0.1 -0.210 42.5-153.9 -55.3 142.7 -0.8 6.3 4.0 84 310 A G 0 0 6 -70,-2.0 -1,-0.1 -68,-0.0 -72,-0.1 0.344 360.0 360.0 -93.1-135.4 2.4 5.1 5.5 85 311 A R 0 0 215 -76,-0.1 -2,-0.1 -70,-0.0 -70,-0.0 0.546 360.0 360.0-120.6 360.0 5.5 7.1 6.7