==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CELL INVASION 07-MAR-05 1Z21 . COMPND 2 MOLECULE: YOP PROTEINS TRANSLOCATION PROTEIN H; . SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; . AUTHOR F.D.SCHUBOT,S.CHERRY,J.E.TROPEA,B.P.AUSTIN,D.S.WAUGH . 96 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5946.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 72.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 61 63.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 0 2 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 42 A S > 0 0 93 0, 0.0 4,-1.8 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 177.1 10.4 -3.0 11.2 2 43 A A H > + 0 0 86 1,-0.2 4,-2.1 2,-0.2 5,-0.1 0.853 360.0 55.3 -67.2 -34.2 8.4 -6.2 11.5 3 44 A E H > S+ 0 0 160 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.898 106.1 50.3 -64.2 -42.5 6.1 -5.0 8.7 4 45 A K H > S+ 0 0 152 2,-0.2 4,-1.7 1,-0.2 -2,-0.2 0.924 111.0 48.4 -64.1 -44.6 9.1 -4.5 6.3 5 46 A T H X S+ 0 0 94 -4,-1.8 4,-1.6 1,-0.2 -1,-0.2 0.911 110.1 51.8 -60.4 -45.0 10.4 -8.0 7.0 6 47 A R H X S+ 0 0 31 -4,-2.1 4,-1.9 1,-0.2 -1,-0.2 0.849 105.8 55.6 -63.0 -32.8 7.0 -9.5 6.5 7 48 A E H X S+ 0 0 73 -4,-1.7 4,-2.5 2,-0.2 -1,-0.2 0.880 102.0 56.2 -68.9 -35.3 6.7 -7.7 3.2 8 49 A V H X S+ 0 0 78 -4,-1.7 4,-2.2 1,-0.2 -1,-0.2 0.908 106.8 51.7 -59.4 -39.2 10.0 -9.3 2.0 9 50 A L H X S+ 0 0 42 -4,-1.6 4,-2.5 2,-0.2 -2,-0.2 0.931 109.9 47.0 -61.0 -47.1 8.3 -12.6 2.7 10 51 A W H X S+ 0 0 1 -4,-1.9 4,-2.7 1,-0.2 5,-0.3 0.886 109.0 56.3 -65.5 -36.6 5.3 -11.7 0.6 11 52 A Q H X S+ 0 0 107 -4,-2.5 4,-1.8 1,-0.2 -1,-0.2 0.929 111.6 42.2 -56.7 -49.2 7.6 -10.5 -2.2 12 53 A Q H X S+ 0 0 119 -4,-2.2 4,-1.8 2,-0.2 -2,-0.2 0.853 113.5 53.2 -69.6 -35.8 9.3 -13.9 -2.3 13 54 A Y H < S+ 0 0 30 -4,-2.5 7,-0.5 -5,-0.2 -2,-0.2 0.967 113.4 40.3 -63.0 -52.3 6.0 -15.8 -2.0 14 55 A Y H < S+ 0 0 84 -4,-2.7 -2,-0.2 1,-0.2 -1,-0.2 0.807 115.2 51.3 -72.2 -30.9 4.3 -14.0 -4.9 15 56 A A H < S+ 0 0 77 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.909 91.3 100.5 -66.3 -41.1 7.4 -14.0 -7.2 16 57 A S < - 0 0 31 -4,-1.8 -3,-0.0 -5,-0.2 -4,-0.0 0.007 68.0-135.4 -55.1 147.2 7.9 -17.7 -6.7 17 58 A N S S+ 0 0 154 1,-0.3 -1,-0.0 2,-0.1 -3,-0.0 -0.875 94.9 25.5-153.5 112.8 6.8 -20.1 -9.3 18 59 A P S S- 0 0 104 0, 0.0 -1,-0.3 0, 0.0 -3,-0.0 0.630 120.6 -93.9 -68.2 166.2 5.4 -22.5 -8.5 19 60 A P - 0 0 70 0, 0.0 2,-0.8 0, 0.0 -2,-0.1 -0.274 39.8-127.6 -52.9 128.5 4.1 -20.9 -5.3 20 61 A D > - 0 0 68 -7,-0.5 4,-1.6 -8,-0.2 3,-0.3 -0.715 22.0-171.3 -89.5 108.7 6.6 -21.7 -2.5 21 62 A H H > S+ 0 0 120 -2,-0.8 4,-2.2 1,-0.2 -1,-0.2 0.685 82.5 63.9 -74.4 -20.8 4.7 -23.1 0.5 22 63 A A H > S+ 0 0 68 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.907 106.1 45.6 -67.6 -38.4 7.8 -23.0 2.8 23 64 A V H > S+ 0 0 29 -3,-0.3 4,-2.2 2,-0.2 -2,-0.2 0.923 112.9 49.9 -67.9 -44.0 7.7 -19.2 2.5 24 65 A L H X S+ 0 0 7 -4,-1.6 4,-2.4 1,-0.2 -2,-0.2 0.865 106.6 56.1 -63.7 -34.0 4.0 -19.2 3.1 25 66 A E H X S+ 0 0 60 -4,-2.2 4,-1.4 2,-0.2 -1,-0.2 0.916 105.8 50.4 -65.3 -42.0 4.5 -21.4 6.2 26 67 A V H >< S+ 0 0 79 -4,-1.9 3,-0.6 1,-0.2 -2,-0.2 0.958 112.5 47.9 -56.5 -47.3 6.9 -18.8 7.6 27 68 A L H 3< S+ 0 0 0 -4,-2.2 4,-0.5 1,-0.2 -2,-0.2 0.890 114.0 47.0 -57.6 -40.3 4.2 -16.1 6.9 28 69 A A H 3X S+ 0 0 0 -4,-2.4 4,-2.8 1,-0.2 5,-0.2 0.670 91.3 85.8 -79.5 -17.2 1.5 -18.3 8.5 29 70 A T H S+ 0 0 42 0, 0.0 4,-2.1 0, 0.0 -1,-0.2 0.800 116.7 54.4 -63.5 -27.0 2.7 -16.1 13.9 31 72 A V H > S+ 0 0 0 -4,-0.5 4,-2.3 2,-0.2 -2,-0.2 0.927 108.7 46.8 -72.7 -45.6 -0.9 -16.0 12.6 32 73 A R H X S+ 0 0 23 -4,-2.8 4,-2.9 2,-0.2 5,-0.3 0.925 111.9 52.1 -57.3 -48.0 -1.5 -19.7 13.5 33 74 A E H X S+ 0 0 128 -4,-2.3 4,-1.7 -5,-0.2 -2,-0.2 0.917 111.4 46.3 -55.8 -44.5 0.1 -19.0 16.9 34 75 A A H X S+ 0 0 24 -4,-2.1 4,-1.0 2,-0.2 -1,-0.2 0.873 114.4 47.5 -68.2 -36.8 -2.2 -16.1 17.6 35 76 A L H X S+ 0 0 0 -4,-2.3 4,-2.5 2,-0.2 5,-0.3 0.882 110.3 51.4 -72.8 -38.9 -5.3 -18.0 16.4 36 77 A L H X S+ 0 0 68 -4,-2.9 4,-2.3 1,-0.2 5,-0.3 0.852 106.1 56.6 -65.7 -32.0 -4.4 -21.1 18.5 37 78 A A H < S+ 0 0 89 -4,-1.7 -1,-0.2 -5,-0.3 -2,-0.2 0.802 116.5 35.7 -67.9 -30.1 -4.0 -18.7 21.5 38 79 A R H < S+ 0 0 101 -4,-1.0 -2,-0.2 -3,-0.3 -1,-0.2 0.789 138.4 14.0 -89.2 -31.6 -7.6 -17.5 21.0 39 80 A F H >< S+ 0 0 0 -4,-2.5 3,-1.5 -5,-0.1 46,-0.2 0.405 91.4 100.4-129.4 -2.7 -9.3 -20.7 19.8 40 81 A G T 3< S+ 0 0 30 -4,-2.3 -3,-0.1 -5,-0.3 -4,-0.1 0.758 92.4 41.6 -65.4 -28.2 -7.0 -23.7 20.6 41 82 A Q T 3 S+ 0 0 185 -5,-0.3 2,-0.5 -4,-0.1 -1,-0.3 0.240 90.1 113.3-100.6 9.3 -8.9 -24.7 23.7 42 83 A H < + 0 0 67 -3,-1.5 42,-0.4 2,-0.0 2,-0.3 -0.726 41.1 173.0 -83.9 127.4 -12.3 -24.1 22.1 43 84 A Q + 0 0 173 -2,-0.5 2,-0.1 41,-0.1 -2,-0.1 -0.787 40.5 30.6-124.5 172.5 -14.3 -27.2 21.6 44 85 A G S S- 0 0 66 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.452 102.9 -2.2 74.5-152.3 -17.9 -27.8 20.5 45 86 A S - 0 0 109 -2,-0.1 -2,-0.1 1,-0.1 39,-0.1 -0.507 65.6-120.7 -91.0 139.0 -19.7 -25.5 18.1 46 87 A V - 0 0 26 -2,-0.2 -1,-0.1 1,-0.1 39,-0.0 -0.277 13.7-144.8 -67.0 155.2 -18.5 -22.4 16.5 47 88 A V >> - 0 0 70 1,-0.2 4,-3.1 2,-0.0 3,-1.5 -0.835 12.8-167.5-125.4 86.7 -20.4 -19.1 17.0 48 89 A P H 3> S+ 0 0 59 0, 0.0 4,-2.0 0, 0.0 -1,-0.2 0.828 81.6 54.1 -48.9 -47.0 -20.1 -17.2 13.7 49 90 A A H 34 S+ 0 0 88 1,-0.2 -2,-0.0 2,-0.2 0, 0.0 0.752 123.4 28.9 -64.3 -23.4 -21.3 -13.8 14.9 50 91 A I H <> S+ 0 0 97 -3,-1.5 4,-1.1 2,-0.1 -1,-0.2 0.833 123.8 43.9 -98.3 -47.7 -18.7 -13.8 17.7 51 92 A D H X S+ 0 0 6 -4,-3.1 4,-2.6 2,-0.2 -2,-0.2 0.796 105.9 57.4 -78.1 -34.9 -15.8 -15.9 16.4 52 93 A L H X S+ 0 0 12 -4,-2.0 4,-2.8 -5,-0.4 5,-0.2 0.944 106.6 48.3 -67.8 -47.5 -15.6 -14.5 12.8 53 94 A P H > S+ 0 0 59 0, 0.0 4,-1.9 0, 0.0 -1,-0.2 0.887 113.9 48.9 -54.0 -40.5 -15.0 -10.9 13.9 54 95 A E H X S+ 0 0 64 -4,-1.1 4,-1.9 2,-0.2 -2,-0.2 0.926 111.6 49.0 -64.3 -46.2 -12.4 -12.1 16.3 55 96 A L H X S+ 0 0 0 -4,-2.6 4,-2.2 1,-0.2 -1,-0.2 0.913 111.9 48.1 -59.7 -44.3 -10.7 -14.2 13.6 56 97 A R H X S+ 0 0 80 -4,-2.8 4,-2.4 1,-0.2 -1,-0.2 0.874 107.1 57.4 -66.6 -33.7 -10.7 -11.3 11.2 57 98 A S H X S+ 0 0 62 -4,-1.9 4,-0.9 -5,-0.2 -1,-0.2 0.896 107.7 47.4 -62.1 -42.4 -9.2 -9.1 13.9 58 99 A V H >X S+ 0 0 1 -4,-1.9 3,-0.9 2,-0.2 4,-0.6 0.932 110.6 51.0 -62.3 -48.2 -6.3 -11.5 14.3 59 100 A L H >X S+ 0 0 1 -4,-2.2 4,-2.4 1,-0.3 3,-1.5 0.916 106.6 55.8 -56.9 -42.2 -5.7 -11.6 10.5 60 101 A Q H 3< S+ 0 0 99 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.712 93.6 68.8 -64.3 -25.1 -5.7 -7.8 10.4 61 102 A Q H << S+ 0 0 120 -3,-0.9 -1,-0.3 -4,-0.9 -2,-0.2 0.774 117.0 22.7 -60.0 -27.6 -2.9 -7.7 12.9 62 103 A F H << S+ 0 0 58 -3,-1.5 2,-0.3 -4,-0.6 -2,-0.2 0.775 127.4 20.6-110.5 -42.2 -0.6 -9.2 10.3 63 104 A D S < S- 0 0 9 -4,-2.4 -1,-0.3 3,-0.0 3,-0.1 -0.992 72.4-109.5-141.2 144.6 -2.0 -8.5 6.8 64 105 A S - 0 0 84 -2,-0.3 5,-0.3 1,-0.1 4,-0.3 -0.316 55.8 -80.1 -67.2 151.8 -4.3 -6.1 5.1 65 106 A F S S+ 0 0 142 3,-0.1 2,-0.3 2,-0.1 -1,-0.1 -0.236 89.1 65.6 -57.0 139.8 -7.6 -7.4 3.8 66 107 A G S >> S- 0 0 24 -3,-0.1 3,-1.3 1,-0.1 4,-0.8 -0.969 102.2 -23.1 147.3-158.1 -7.5 -9.3 0.5 67 108 A K H 3> S+ 0 0 137 -2,-0.3 4,-1.8 1,-0.3 5,-0.2 0.681 121.0 71.0 -61.9 -19.7 -6.1 -12.4 -1.2 68 109 A R H 3> S+ 0 0 63 -4,-0.3 4,-2.6 1,-0.2 -1,-0.3 0.884 93.6 55.7 -62.3 -38.8 -3.4 -12.5 1.5 69 110 A W H <> S+ 0 0 10 -3,-1.3 4,-2.8 -5,-0.3 -1,-0.2 0.906 105.8 51.1 -58.7 -42.6 -6.0 -13.6 4.0 70 111 A E H X S+ 0 0 69 -4,-0.8 4,-2.1 2,-0.2 5,-0.2 0.929 112.7 44.7 -63.8 -45.7 -7.0 -16.5 1.8 71 112 A A H X S+ 0 0 15 -4,-1.8 4,-2.3 2,-0.2 -1,-0.2 0.917 115.2 48.0 -63.8 -46.0 -3.5 -17.8 1.5 72 113 A I H X S+ 0 0 1 -4,-2.6 4,-2.9 2,-0.2 -2,-0.2 0.939 111.2 50.4 -59.5 -48.7 -2.8 -17.4 5.2 73 114 A L H X S+ 0 0 0 -4,-2.8 4,-2.0 1,-0.2 -2,-0.2 0.918 112.0 47.1 -58.3 -46.9 -6.0 -19.1 6.2 74 115 A L H X S+ 0 0 96 -4,-2.1 4,-1.3 2,-0.2 -1,-0.2 0.912 114.0 47.8 -62.3 -42.3 -5.3 -22.1 4.0 75 116 A Q H X S+ 0 0 22 -4,-2.3 4,-0.9 1,-0.2 -2,-0.2 0.901 107.0 55.9 -70.0 -38.2 -1.7 -22.4 5.2 76 117 A V H >< S+ 0 0 0 -4,-2.9 3,-1.2 1,-0.2 4,-0.2 0.933 104.7 54.7 -53.7 -47.7 -2.8 -22.1 8.9 77 118 A L H >< S+ 0 0 39 -4,-2.0 3,-1.7 1,-0.3 -1,-0.2 0.867 98.7 62.3 -55.5 -39.8 -5.1 -25.1 8.3 78 119 A E H 3< S+ 0 0 155 -4,-1.3 -1,-0.3 1,-0.3 -2,-0.2 0.782 105.6 46.8 -57.3 -30.4 -2.1 -27.2 7.0 79 120 A G T << 0 0 44 -3,-1.2 -1,-0.3 -4,-0.9 -2,-0.2 0.275 360.0 360.0 -97.0 8.1 -0.4 -26.8 10.4 80 121 A I < 0 0 57 -3,-1.7 -1,-0.2 -4,-0.2 -2,-0.2 0.079 360.0 360.0-128.7 360.0 -3.5 -27.8 12.5 81 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 82 130 A L > 0 0 59 0, 0.0 4,-1.9 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 114.9 -8.7 -28.7 16.4 83 131 A P H > + 0 0 106 0, 0.0 4,-2.1 0, 0.0 5,-0.2 0.734 360.0 64.8 -69.7 -21.7 -12.0 -28.9 14.5 84 132 A Y H > S+ 0 0 14 -42,-0.4 4,-2.2 2,-0.2 5,-0.1 0.963 108.4 35.9 -64.6 -54.7 -13.2 -25.7 16.1 85 133 A L H > S+ 0 0 0 -43,-0.2 4,-2.5 -46,-0.2 5,-0.2 0.884 116.9 54.9 -68.3 -38.3 -10.5 -23.4 14.5 86 134 A S H X S+ 0 0 25 -4,-1.9 4,-2.0 2,-0.2 -1,-0.2 0.901 110.0 46.3 -59.5 -40.8 -10.6 -25.5 11.3 87 135 A E H X S+ 0 0 82 -4,-2.1 4,-2.0 2,-0.2 -2,-0.2 0.900 111.0 52.1 -70.7 -42.4 -14.4 -24.9 11.0 88 136 A L H X S+ 0 0 0 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.899 109.5 50.4 -54.4 -46.9 -14.0 -21.2 11.7 89 137 A I H X S+ 0 0 0 -4,-2.5 4,-2.6 1,-0.2 -2,-0.2 0.925 108.5 51.4 -61.8 -45.1 -11.4 -20.9 9.0 90 138 A N H X S+ 0 0 75 -4,-2.0 4,-1.7 1,-0.2 -1,-0.2 0.864 107.6 52.7 -64.5 -33.5 -13.7 -22.7 6.5 91 139 A K H X S+ 0 0 76 -4,-2.0 4,-1.5 2,-0.2 -1,-0.2 0.910 111.3 46.8 -67.4 -41.5 -16.6 -20.3 7.3 92 140 A E H X S+ 0 0 2 -4,-2.1 4,-2.3 2,-0.2 -2,-0.2 0.894 109.0 54.5 -64.5 -39.9 -14.4 -17.3 6.7 93 141 A L H X S+ 0 0 30 -4,-2.6 4,-0.8 1,-0.2 -2,-0.2 0.890 105.3 54.0 -62.3 -35.3 -13.1 -18.8 3.4 94 142 A M H < S+ 0 0 141 -4,-1.7 3,-0.4 1,-0.2 -1,-0.2 0.884 110.1 47.3 -65.4 -37.3 -16.7 -19.2 2.3 95 143 A I H < S+ 0 0 99 -4,-1.5 -2,-0.2 1,-0.2 -1,-0.2 0.873 107.7 55.0 -68.3 -38.8 -17.2 -15.5 2.9 96 144 A L H < 0 0 21 -4,-2.3 -1,-0.2 -5,-0.1 -2,-0.2 0.600 360.0 360.0 -74.9 -10.8 -14.0 -14.5 1.1 97 145 A L < 0 0 178 -4,-0.8 -2,-0.2 -3,-0.4 -3,-0.1 0.899 360.0 360.0 -72.9 360.0 -15.2 -16.4 -2.0