==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 08-MAR-05 1Z2Q . COMPND 2 MOLECULE: LM5-1; . SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA MAJOR; . AUTHOR H.D.T.MERTENS,J.M.CALLAGHAN,M.J.MCCONVILLE,P.R.GOOLEY . 84 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6887.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 33 39.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 11.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 11.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 118 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 140.3 -15.1 20.2 -17.1 2 2 A P - 0 0 129 0, 0.0 3,-0.1 0, 0.0 0, 0.0 -0.208 360.0-121.4 -59.1 148.4 -11.5 19.0 -17.1 3 3 A L > - 0 0 97 1,-0.2 3,-0.5 2,-0.1 2,-0.2 0.825 48.7-156.7 -60.6 -32.0 -9.9 18.0 -13.8 4 4 A G T 3 - 0 0 59 1,-0.2 -1,-0.2 3,-0.0 0, 0.0 -0.551 51.7 -20.9 90.2-156.1 -7.3 20.7 -14.4 5 5 A S T 3 S+ 0 0 137 -2,-0.2 2,-0.4 -3,-0.1 -1,-0.2 0.825 133.0 53.8 -59.4 -33.1 -3.8 20.7 -12.9 6 6 A M < + 0 0 164 -3,-0.5 2,-0.3 2,-0.0 0, 0.0 -0.831 65.8 171.1-107.6 144.6 -5.0 18.4 -10.1 7 7 A G > - 0 0 42 -2,-0.4 3,-0.6 1,-0.0 -3,-0.0 -0.962 32.4-153.9-155.0 134.1 -6.7 15.1 -10.5 8 8 A E T 3 S+ 0 0 193 -2,-0.3 -1,-0.0 1,-0.2 -2,-0.0 0.265 76.2 100.8 -89.2 12.9 -7.8 12.3 -8.2 9 9 A K T 3 + 0 0 172 2,-0.1 -1,-0.2 0, 0.0 2,-0.1 0.528 57.3 117.7 -73.1 -3.0 -7.6 9.8 -11.1 10 10 A Q < - 0 0 140 -3,-0.6 2,-0.3 1,-0.0 0, 0.0 -0.359 54.2-151.8 -66.2 142.1 -4.3 8.9 -9.6 11 11 A S - 0 0 98 -2,-0.1 2,-0.4 3,-0.0 3,-0.1 -0.868 3.5-152.3-118.6 152.0 -3.9 5.3 -8.3 12 12 A K + 0 0 141 -2,-0.3 30,-0.0 1,-0.2 49,-0.0 -0.949 66.0 17.2-125.1 144.9 -1.7 3.9 -5.5 13 13 A G S S- 0 0 23 -2,-0.4 2,-0.5 29,-0.2 -1,-0.2 0.989 74.3-139.7 62.0 82.2 -0.2 0.4 -5.1 14 14 A Y - 0 0 146 29,-0.3 2,-0.6 28,-0.2 -1,-0.1 -0.613 10.9-146.1 -76.8 121.8 -0.3 -1.2 -8.5 15 15 A W - 0 0 174 -2,-0.5 2,-0.4 24,-0.1 30,-0.2 -0.792 9.1-141.7 -92.2 118.2 -1.3 -4.9 -8.3 16 16 A Q - 0 0 38 28,-1.6 5,-0.1 -2,-0.6 28,-0.0 -0.651 27.2-110.9 -82.0 127.1 0.3 -7.1 -10.9 17 17 A E > - 0 0 101 -2,-0.4 4,-2.5 1,-0.1 29,-0.1 -0.114 20.0-115.8 -55.9 151.9 -2.0 -9.8 -12.2 18 18 A D T 4 S+ 0 0 72 1,-0.2 -1,-0.1 2,-0.2 -2,-0.1 0.888 116.9 47.6 -54.4 -45.2 -1.4 -13.5 -11.4 19 19 A E T 4 S+ 0 0 164 1,-0.2 -1,-0.2 3,-0.1 -3,-0.0 0.892 112.5 47.5 -66.6 -41.6 -0.7 -14.2 -15.1 20 20 A D T 4 S+ 0 0 90 1,-0.3 -2,-0.2 2,-0.1 -1,-0.2 0.838 117.8 44.6 -68.8 -32.5 1.7 -11.3 -15.6 21 21 A A < + 0 0 2 -4,-2.5 -1,-0.3 1,-0.1 4,-0.1 -0.667 63.7 152.9-114.1 74.4 3.5 -12.3 -12.4 22 22 A P + 0 0 79 0, 0.0 9,-1.8 0, 0.0 2,-0.3 0.597 69.5 42.6 -76.5 -11.8 3.9 -16.1 -12.6 23 23 A A B S-A 30 0A 33 7,-0.2 7,-0.3 -3,-0.1 2,-0.2 -0.938 103.8 -81.8-134.7 155.4 7.0 -15.9 -10.4 24 24 A C > - 0 0 3 5,-3.8 4,-2.1 -2,-0.3 23,-0.2 -0.381 29.2-148.9 -60.4 122.8 7.9 -14.0 -7.3 25 25 A N T 4 S+ 0 0 73 21,-1.6 -1,-0.2 -2,-0.2 22,-0.1 0.756 96.8 42.4 -61.7 -26.7 9.0 -10.5 -8.1 26 26 A G T 4 S+ 0 0 51 20,-0.4 -1,-0.2 3,-0.1 21,-0.1 0.936 134.5 10.6 -87.3 -56.4 11.4 -10.7 -5.1 27 27 A C T 4 S- 0 0 75 2,-0.1 -2,-0.2 0, 0.0 3,-0.1 0.473 92.1-125.3-104.6 -3.6 13.0 -14.1 -5.2 28 28 A G < + 0 0 46 -4,-2.1 -3,-0.1 1,-0.2 2,-0.1 0.616 54.3 156.9 71.2 10.7 11.8 -15.2 -8.6 29 29 A C - 0 0 44 -6,-0.1 -5,-3.8 1,-0.1 2,-0.3 -0.432 44.3-114.0 -71.7 143.5 10.3 -18.4 -7.1 30 30 A V B -A 23 0A 105 -7,-0.3 2,-0.3 -2,-0.1 -7,-0.2 -0.595 24.6-124.0 -81.4 137.5 7.5 -20.0 -9.2 31 31 A F - 0 0 25 -9,-1.8 2,-0.2 -2,-0.3 5,-0.1 -0.635 34.0-178.7 -83.3 134.4 4.0 -20.0 -7.8 32 32 A T > - 0 0 73 -2,-0.3 3,-0.6 4,-0.1 -1,-0.0 -0.753 45.0 -89.9-126.4 172.6 2.3 -23.4 -7.5 33 33 A T T 3 S+ 0 0 146 1,-0.3 -2,-0.0 -2,-0.2 -1,-0.0 0.852 128.3 46.4 -50.5 -40.8 -1.0 -24.9 -6.4 34 34 A T T 3 S+ 0 0 118 1,-0.1 2,-0.8 2,-0.1 -1,-0.3 0.780 102.2 75.3 -75.8 -26.3 0.3 -25.2 -2.8 35 35 A V S < S- 0 0 51 -3,-0.6 2,-0.1 -5,-0.1 -1,-0.1 -0.788 78.3-144.5 -93.6 113.4 1.7 -21.7 -2.8 36 36 A R - 0 0 189 -2,-0.8 13,-0.4 -5,-0.1 2,-0.3 -0.452 18.1-119.1 -73.6 143.7 -0.9 -19.0 -2.5 37 37 A R + 0 0 90 -2,-0.1 2,-0.3 11,-0.1 11,-0.2 -0.625 38.0 172.4 -86.3 142.1 -0.4 -15.8 -4.4 38 38 A H E -B 47 0B 42 9,-0.7 9,-3.1 -2,-0.3 2,-0.3 -0.915 22.2-132.5-144.0 169.2 -0.2 -12.5 -2.5 39 39 A H E -B 46 0B 62 -2,-0.3 2,-0.3 7,-0.3 7,-0.2 -0.963 17.1-125.7-128.8 146.8 0.6 -8.8 -3.0 40 40 A C > - 0 0 5 5,-1.8 4,-0.9 -2,-0.3 29,-0.2 -0.695 14.7-138.3 -90.4 138.0 2.8 -6.3 -1.2 41 41 A R T 4 S+ 0 0 145 27,-1.4 28,-0.1 -2,-0.3 -1,-0.1 0.541 99.2 43.4 -72.8 -6.9 1.2 -3.1 0.1 42 42 A N T 4 S+ 0 0 20 26,-0.1 -29,-0.2 3,-0.1 -28,-0.2 0.858 126.8 19.2-100.7 -70.3 4.2 -1.1 -1.1 43 43 A C T 4 S- 0 0 31 -30,-0.1 -29,-0.3 2,-0.1 -2,-0.1 0.746 89.9-137.5 -76.4 -23.8 5.4 -2.2 -4.5 44 44 A G < + 0 0 4 -4,-0.9 -28,-1.6 1,-0.3 2,-0.2 0.735 55.7 138.3 72.9 22.0 2.1 -3.9 -5.3 45 45 A Y - 0 0 108 -30,-0.2 -5,-1.8 1,-0.1 2,-0.4 -0.589 62.4 -92.5 -98.1 160.8 3.9 -6.9 -6.8 46 46 A V E +B 39 0B 0 -7,-0.2 -21,-1.6 -2,-0.2 2,-0.4 -0.580 47.0 179.1 -76.0 129.0 3.0 -10.5 -6.4 47 47 A L E -B 38 0B 1 -9,-3.1 -9,-0.7 -2,-0.4 5,-0.1 -0.994 21.6-133.9-133.4 138.6 4.8 -12.2 -3.5 48 48 A C > - 0 0 6 -2,-0.4 4,-0.7 -11,-0.2 3,-0.2 -0.185 42.6 -90.8 -77.5 176.3 4.6 -15.8 -2.2 49 49 A G T >4 S+ 0 0 30 -13,-0.4 3,-1.6 1,-0.2 -1,-0.1 0.949 128.3 49.2 -54.1 -52.8 4.2 -16.6 1.5 50 50 A D G >4 S+ 0 0 107 1,-0.3 3,-0.7 2,-0.2 -1,-0.2 0.823 114.5 45.4 -55.8 -35.8 8.0 -16.8 2.0 51 51 A C G 34 S+ 0 0 4 1,-0.2 20,-0.3 -3,-0.2 -1,-0.3 0.460 119.9 42.0 -88.3 -1.7 8.5 -13.5 0.2 52 52 A S G << S+ 0 0 23 -3,-1.6 -1,-0.2 -4,-0.7 -2,-0.2 -0.036 80.9 104.0-132.0 28.6 5.6 -11.9 2.1 53 53 A R < + 0 0 180 -3,-0.7 -3,-0.1 15,-0.1 -2,-0.1 0.642 64.3 86.6 -84.7 -16.4 6.3 -13.4 5.6 54 54 A H - 0 0 85 15,-0.5 15,-1.0 -4,-0.1 2,-0.4 -0.366 64.7-151.1 -81.3 164.7 7.7 -10.0 6.8 55 55 A R E +C 68 0C 178 13,-0.2 2,-0.3 -2,-0.1 13,-0.2 -0.999 22.6 152.8-140.5 136.2 5.6 -7.3 8.3 56 56 A A E -C 67 0C 16 11,-4.0 11,-3.7 -2,-0.4 2,-0.2 -0.990 37.1-114.4-159.0 154.3 6.1 -3.5 8.3 57 57 A A E - 0 0 30 9,-0.4 7,-0.2 -2,-0.3 3,-0.1 -0.576 17.3-152.7 -89.9 154.0 4.1 -0.2 8.5 58 58 A I E > +C 63 0C 0 5,-0.8 5,-3.6 7,-0.5 3,-0.4 -0.697 18.8 171.5-130.3 79.8 4.0 2.3 5.6 59 59 A P T 5S+ 0 0 96 0, 0.0 5,-0.1 0, 0.0 -1,-0.1 0.582 81.3 56.0 -65.1 -9.0 3.5 5.8 7.0 60 60 A M T 5S+ 0 0 157 3,-0.2 4,-0.1 1,-0.2 -2,-0.1 0.838 107.6 45.6 -89.1 -37.8 4.2 7.2 3.5 61 61 A R T 5S- 0 0 115 -3,-0.4 -1,-0.2 2,-0.2 3,-0.1 0.408 129.5 -97.2 -83.0 1.0 1.5 5.1 1.8 62 62 A G T 5S+ 0 0 60 -4,-0.4 2,-0.9 1,-0.2 3,-0.1 0.506 86.0 132.3 94.1 6.9 -0.8 6.1 4.6 63 63 A I E < +C 58 0C 22 -5,-3.6 -5,-0.8 1,-0.2 -1,-0.2 -0.807 20.9 165.9 -96.2 102.4 -0.2 2.9 6.6 64 64 A T E + 0 0 110 -2,-0.9 -1,-0.2 -7,-0.2 -7,-0.1 0.672 62.7 68.1 -88.1 -18.5 0.5 3.8 10.2 65 65 A E E S- 0 0 123 -3,-0.1 -7,-0.5 -7,-0.1 -9,-0.1 -0.806 102.0 -93.1-103.1 142.5 0.1 0.2 11.4 66 66 A P E + 0 0 75 0, 0.0 -9,-0.4 0, 0.0 2,-0.3 -0.317 53.8 179.2 -56.4 124.0 2.5 -2.5 10.5 67 67 A E E -C 56 0C 75 -11,-3.7 -11,-4.0 -4,-0.1 2,-0.2 -0.794 34.3 -79.6-124.7 166.8 1.2 -4.3 7.4 68 68 A R E +C 55 0C 133 -2,-0.3 -27,-1.4 -13,-0.2 2,-0.2 -0.451 56.4 156.3 -70.6 136.7 2.4 -7.2 5.2 69 69 A V - 0 0 1 -15,-1.0 -15,-0.5 -29,-0.2 2,-0.1 -0.841 37.0-101.7-145.2-179.3 5.1 -6.4 2.6 70 70 A C > - 0 0 5 -2,-0.2 4,-1.3 -18,-0.1 -18,-0.1 -0.190 43.2 -92.6 -97.6-168.4 7.9 -8.0 0.6 71 71 A D H > S+ 0 0 64 -20,-0.3 4,-1.4 2,-0.2 5,-0.1 0.906 121.2 44.1 -76.3 -43.7 11.6 -8.1 1.2 72 72 A A H > S+ 0 0 65 2,-0.2 4,-3.1 1,-0.2 5,-0.2 0.932 116.3 45.9 -67.8 -46.2 12.6 -5.1 -1.0 73 73 A C H > S+ 0 0 12 1,-0.2 4,-2.4 2,-0.2 5,-0.4 0.903 108.8 56.4 -63.8 -40.6 9.7 -2.9 0.3 74 74 A Y H X S+ 0 0 76 -4,-1.3 4,-1.5 1,-0.2 -1,-0.2 0.893 113.9 41.8 -56.8 -39.6 10.4 -3.8 3.9 75 75 A L H X S+ 0 0 94 -4,-1.4 4,-1.2 2,-0.2 -2,-0.2 0.941 109.5 54.6 -72.9 -52.5 14.0 -2.6 3.3 76 76 A A H >< S+ 0 0 64 -4,-3.1 3,-0.9 1,-0.3 4,-0.3 0.925 115.8 40.3 -50.0 -48.3 13.2 0.6 1.3 77 77 A L H >< S+ 0 0 33 -4,-2.4 3,-2.2 1,-0.3 -1,-0.3 0.913 109.0 62.0 -65.3 -40.8 10.9 1.7 4.1 78 78 A R H 3< S+ 0 0 164 -4,-1.5 -1,-0.3 -5,-0.4 -2,-0.2 0.679 84.8 78.8 -57.0 -19.7 13.5 0.4 6.6 79 79 A S T << S+ 0 0 90 -4,-1.2 -1,-0.3 -3,-0.9 -2,-0.2 0.797 75.6 95.3 -61.5 -28.3 15.9 3.0 5.0 80 80 A S S < S- 0 0 74 -3,-2.2 2,-0.4 -4,-0.3 -3,-0.0 -0.214 84.5-109.8 -62.7 154.7 14.2 5.6 7.2 81 81 A N - 0 0 158 1,-0.0 2,-0.4 0, 0.0 -1,-0.1 -0.722 26.5-123.9 -91.4 136.4 15.7 6.5 10.5 82 82 A M - 0 0 185 -2,-0.4 -1,-0.0 -4,-0.1 -4,-0.0 -0.641 28.2-116.4 -81.6 129.9 13.9 5.5 13.7 83 83 A A 0 0 108 -2,-0.4 -1,-0.1 1,-0.2 0, 0.0 -0.310 360.0 360.0 -63.9 145.2 13.1 8.4 16.1 84 84 A G 0 0 150 -2,-0.0 -1,-0.2 0, 0.0 -2,-0.0 0.083 360.0 360.0-176.2 360.0 14.7 8.3 19.5