==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING, DNA BINDING PROTEIN 16-MAR-05 1Z4H . COMPND 2 MOLECULE: TOR INHIBITION PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR L.ELANTAK,M.ANSALDI,F.GUERLESQUIN,V.MEJEAN,X.MORELLI . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5022.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 72.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 42.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 227 0, 0.0 2,-1.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 77.9 -11.9 11.9 -6.6 2 2 A Q + 0 0 192 2,-0.0 2,-0.5 0, 0.0 0, 0.0 -0.683 360.0 175.4 -80.7 96.4 -9.6 13.2 -3.9 3 3 A H - 0 0 136 -2,-1.2 2,-0.4 2,-0.0 0, 0.0 -0.914 16.0-151.5-107.0 127.3 -10.5 11.0 -1.0 4 4 A E + 0 0 186 -2,-0.5 2,-0.3 0, 0.0 -2,-0.0 -0.803 17.7 174.8-103.0 140.2 -8.5 11.3 2.3 5 5 A L - 0 0 46 -2,-0.4 4,-0.1 4,-0.1 6,-0.0 -0.835 26.7-115.0-134.0 168.8 -8.0 8.5 4.7 6 6 A Q - 0 0 128 -2,-0.3 44,-0.3 2,-0.2 45,-0.1 -0.635 47.4 -86.5-102.4 165.0 -6.1 7.9 7.9 7 7 A P S S+ 0 0 83 0, 0.0 44,-1.1 0, 0.0 2,-0.9 0.824 124.8 49.8 -38.7 -45.3 -3.2 5.3 8.4 8 8 A D S S+ 0 0 79 42,-0.2 2,-0.3 41,-0.1 -2,-0.2 -0.841 89.7 101.2-102.6 101.8 -5.7 2.6 9.1 9 9 A S S S- 0 0 27 -2,-0.9 41,-1.3 -4,-0.1 2,-0.7 -0.940 74.5 -81.2-164.2 176.3 -8.3 2.7 6.3 10 10 A L E +A 49 0A 117 -2,-0.3 2,-0.2 39,-0.2 39,-0.2 -0.824 45.3 174.1-103.1 115.3 -9.3 1.0 3.1 11 11 A V E -A 48 0A 8 37,-3.7 37,-2.9 -2,-0.7 2,-0.3 -0.690 18.4-138.1-108.9 165.3 -7.4 1.9 -0.0 12 12 A D > - 0 0 44 -2,-0.2 4,-2.2 35,-0.2 3,-0.4 -0.794 29.9-101.6-121.9 166.5 -7.6 0.4 -3.5 13 13 A L H > S+ 0 0 10 -2,-0.3 4,-2.8 1,-0.2 5,-0.2 0.885 121.6 54.5 -52.7 -44.2 -4.9 -0.5 -6.2 14 14 A K H > S+ 0 0 145 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.898 108.4 51.1 -57.8 -40.5 -5.6 2.6 -8.2 15 15 A F H > S+ 0 0 61 -3,-0.4 4,-3.2 2,-0.2 -1,-0.2 0.941 108.7 49.2 -60.9 -52.6 -5.0 4.6 -5.1 16 16 A I H X S+ 0 0 0 -4,-2.2 4,-3.2 1,-0.2 5,-0.4 0.908 110.7 51.0 -53.3 -46.0 -1.7 2.9 -4.4 17 17 A M H X S+ 0 0 66 -4,-2.8 4,-1.8 2,-0.2 -1,-0.2 0.847 113.1 45.6 -63.7 -34.8 -0.7 3.5 -8.0 18 18 A A H < S+ 0 0 83 -4,-2.0 -2,-0.2 -5,-0.2 -1,-0.2 0.897 115.6 47.5 -68.9 -42.9 -1.6 7.2 -7.5 19 19 A D H < S+ 0 0 39 -4,-3.2 -2,-0.2 -5,-0.1 -3,-0.2 0.885 129.0 22.3 -64.1 -40.7 0.2 7.2 -4.1 20 20 A T H < S- 0 0 23 -4,-3.2 -3,-0.2 -5,-0.2 -2,-0.2 0.859 86.8-136.6-100.4 -42.7 3.3 5.6 -5.5 21 21 A G S < S+ 0 0 64 -4,-1.8 2,-0.2 -5,-0.4 -4,-0.1 0.567 70.1 105.6 89.0 12.2 3.4 6.2 -9.2 22 22 A F S S- 0 0 90 -6,-0.3 -1,-0.3 1,-0.1 2,-0.2 -0.528 73.3 -82.2-118.3-177.5 4.4 2.6 -9.8 23 23 A G >> - 0 0 32 -2,-0.2 4,-1.8 -3,-0.1 3,-0.5 -0.514 35.0-111.5 -92.5 156.3 2.9 -0.7 -11.0 24 24 A K H 3> S+ 0 0 103 1,-0.2 4,-2.1 2,-0.2 5,-0.3 0.853 116.6 57.9 -48.3 -45.6 0.8 -3.2 -9.1 25 25 A T H 3> S+ 0 0 123 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.922 106.9 48.1 -54.0 -46.4 3.6 -5.8 -9.3 26 26 A F H <> S+ 0 0 34 -3,-0.5 4,-3.4 2,-0.2 5,-0.3 0.896 108.8 57.0 -60.0 -42.1 5.9 -3.4 -7.5 27 27 A I H X S+ 0 0 0 -4,-1.8 4,-3.5 2,-0.2 5,-0.4 0.969 106.8 43.7 -55.8 -62.6 3.2 -2.7 -4.9 28 28 A Y H X S+ 0 0 69 -4,-2.1 4,-1.6 1,-0.2 -1,-0.2 0.883 120.8 42.2 -56.5 -41.4 2.6 -6.3 -3.7 29 29 A D H X S+ 0 0 90 -4,-1.8 4,-2.2 -5,-0.3 -1,-0.2 0.971 119.3 42.0 -67.7 -53.5 6.3 -7.0 -3.5 30 30 A R H X S+ 0 0 66 -4,-3.4 4,-1.3 1,-0.2 -2,-0.2 0.870 114.7 49.7 -65.5 -40.6 7.4 -3.7 -2.0 31 31 A I H X>S+ 0 0 0 -4,-3.5 4,-1.5 -5,-0.3 5,-0.7 0.887 109.4 52.1 -70.0 -37.8 4.6 -3.5 0.5 32 32 A K H X5S+ 0 0 111 -4,-1.6 4,-1.6 -5,-0.4 -2,-0.2 0.936 111.4 48.0 -57.7 -44.8 5.3 -7.0 1.7 33 33 A S H <5S+ 0 0 69 -4,-2.2 -2,-0.2 2,-0.2 -1,-0.2 0.750 103.3 66.2 -67.1 -25.6 8.9 -6.0 2.1 34 34 A G H <5S- 0 0 19 -4,-1.3 -2,-0.2 -5,-0.2 -1,-0.2 0.996 139.1 -52.0 -58.5 -69.6 7.6 -2.9 4.0 35 35 A D H <5S- 0 0 86 -4,-1.5 -2,-0.2 17,-0.1 -3,-0.2 0.073 89.0 -80.5-159.5 31.4 6.2 -4.7 7.0 36 36 A L << - 0 0 120 -4,-1.6 -4,-0.2 -5,-0.7 2,-0.1 0.768 60.2 -87.2 63.7 119.2 3.9 -7.3 5.4 37 37 A P - 0 0 42 0, 0.0 4,-0.1 0, 0.0 -5,-0.1 -0.295 29.1-168.9 -61.2 126.9 0.5 -6.0 4.3 38 38 A K + 0 0 60 11,-0.2 12,-0.1 -2,-0.1 -2,-0.0 0.515 52.3 129.6 -84.8 -11.3 -2.2 -6.0 6.9 39 39 A A S S- 0 0 9 10,-0.3 2,-1.4 1,-0.1 9,-0.2 -0.026 70.3-115.7 -38.5 146.2 -4.5 -5.3 3.9 40 40 A K E +B 47 0B 121 7,-1.5 7,-1.4 2,-0.0 2,-0.5 -0.655 49.2 161.5-100.0 81.3 -7.5 -7.5 3.6 41 41 A V E +B 46 0B 70 -2,-1.4 5,-0.2 5,-0.2 7,-0.0 -0.895 9.1 150.3-104.8 125.5 -6.8 -9.4 0.4 42 42 A I S S+ 0 0 150 3,-0.9 -1,-0.1 -2,-0.5 4,-0.1 0.601 75.1 32.5-125.6 -26.6 -8.8 -12.6 -0.1 43 43 A H S S- 0 0 162 2,-1.5 2,-0.5 0, 0.0 3,-0.0 -0.370 124.7 -77.7-134.2 52.6 -9.2 -12.9 -3.9 44 44 A G S S+ 0 0 52 -3,-0.0 2,-0.3 0, 0.0 -3,-0.1 0.042 121.5 30.7 73.1 -29.5 -6.0 -11.4 -5.3 45 45 A R + 0 0 125 -2,-0.5 -2,-1.5 -5,-0.0 -3,-0.9 -0.901 62.9 117.8-143.3 170.7 -7.7 -8.1 -4.6 46 46 A A E S-B 41 0B 45 -2,-0.3 2,-0.3 -5,-0.2 -5,-0.2 -0.608 75.8 -17.1 172.2 -91.5 -10.1 -6.5 -2.1 47 47 A R E -B 40 0B 146 -7,-1.4 -7,-1.5 -2,-0.1 2,-0.4 -0.996 54.5-149.1-143.8 134.1 -9.1 -3.7 0.3 48 48 A W E -A 11 0A 12 -37,-2.9 -37,-3.7 -2,-0.3 2,-0.5 -0.828 16.9-126.0-107.5 142.4 -5.7 -2.5 1.2 49 49 A L E >> -A 10 0A 21 -2,-0.4 3,-1.3 -39,-0.2 4,-0.6 -0.748 10.8-142.7 -87.8 127.9 -4.7 -0.9 4.5 50 50 A Y H >> S+ 0 0 63 -41,-1.3 4,-2.3 -2,-0.5 3,-0.8 0.774 96.6 73.5 -60.9 -27.7 -3.0 2.4 4.1 51 51 A R H 3> S+ 0 0 92 -44,-1.1 4,-2.9 1,-0.3 -1,-0.3 0.891 90.9 56.9 -49.9 -43.6 -0.7 1.5 7.0 52 52 A D H <> S+ 0 0 1 -3,-1.3 4,-2.2 1,-0.2 -1,-0.3 0.813 106.5 50.1 -61.2 -31.3 1.1 -0.9 4.7 53 53 A H H X S+ 0 0 1 -4,-2.2 4,-1.7 -5,-0.2 3,-0.7 0.948 112.5 51.4 -65.1 -49.2 6.5 0.4 2.8 57 57 A K H 3X S+ 0 0 72 -4,-3.8 4,-3.6 1,-0.2 5,-0.3 0.861 102.2 65.1 -53.3 -36.9 7.0 4.1 1.9 58 58 A N H 3X S+ 0 0 108 -4,-1.6 4,-1.6 -5,-0.3 -1,-0.2 0.896 103.1 43.4 -53.3 -46.8 9.1 4.3 5.0 59 59 A K H S+ 0 0 11 -4,-1.7 4,-1.9 2,-0.2 5,-1.1 0.885 113.7 50.7 -74.5 -39.6 11.8 3.6 0.2 61 61 A L H <5S+ 0 0 142 -4,-3.6 -2,-0.2 -5,-0.2 -1,-0.2 0.813 111.1 50.3 -66.9 -31.6 11.7 7.1 1.6 62 62 A S H <5S+ 0 0 100 -4,-1.6 -1,-0.2 -5,-0.3 -2,-0.2 0.899 118.2 36.6 -72.0 -42.1 14.6 6.2 3.8 63 63 A R H <5S- 0 0 185 -4,-1.7 -2,-0.2 -5,-0.1 -1,-0.2 0.655 104.5-132.7 -84.9 -17.9 16.7 4.7 1.0 64 64 A A T <5 - 0 0 75 -4,-1.9 -3,-0.2 1,-0.1 2,-0.2 0.999 23.6-147.5 59.7 73.4 15.5 7.4 -1.5 65 65 A N < 0 0 72 -5,-1.1 -1,-0.1 0, 0.0 -5,-0.0 -0.456 360.0 360.0 -74.3 140.0 14.6 5.1 -4.4 66 66 A G 0 0 150 -2,-0.2 0, 0.0 0, 0.0 0, 0.0 -0.820 360.0 360.0 108.9 360.0 15.1 6.6 -7.9