==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 28-MAR-05 1Z7T . COMPND 2 MOLECULE: BIOTIN/LIPOYL ATTACHMENT PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SUBTILIS . AUTHOR G.CUI,B.XIA . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4791.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 58.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 38.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 3 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A T 0 0 76 0, 0.0 2,-0.3 0, 0.0 65,-0.3 0.000 360.0 360.0 360.0 162.3 4.2 -1.8 -0.6 2 3 A V E -A 65 0A 5 63,-2.2 62,-3.1 40,-0.1 63,-2.2 -0.965 360.0-171.4-135.1 146.5 3.6 -4.6 -3.1 3 4 A S E -A 63 0A 39 -2,-0.3 60,-0.3 60,-0.3 2,-0.1 -0.874 28.2 -98.0-139.3 160.5 6.5 -6.2 -5.0 4 5 A I - 0 0 2 58,-2.9 57,-2.6 -2,-0.3 58,-0.1 -0.455 25.3-158.0 -75.1 157.1 7.5 -8.6 -7.8 5 6 A Q + 0 0 127 55,-0.3 2,-0.3 56,-0.2 55,-0.3 0.114 67.5 39.9-131.1 15.3 8.5 -12.1 -6.6 6 7 A M S S- 0 0 35 53,-0.3 2,-0.3 56,-0.1 56,-0.2 -0.960 86.8 -95.4-156.7 159.8 10.6 -13.4 -9.6 7 8 A A S S+ 0 0 49 -2,-0.3 2,-0.3 52,-0.2 52,-0.3 -0.675 72.5 89.0 -79.3 141.1 13.3 -12.1 -12.0 8 9 A G E S-C 58 0B 12 50,-2.3 50,-2.3 -2,-0.3 2,-0.4 -0.968 75.8 -63.4 170.8-152.9 12.0 -10.8 -15.4 9 10 A N E -CD 57 31B 70 22,-2.3 22,-3.2 -2,-0.3 2,-2.0 -0.994 46.2-115.8-129.3 136.4 10.6 -7.8 -17.3 10 11 A L E - 0 0 0 46,-3.0 45,-2.2 -2,-0.4 46,-0.5 -0.485 30.5-167.0 -81.1 73.7 7.3 -6.2 -16.2 11 12 A W E - 0 0 102 -2,-2.0 2,-0.3 43,-0.2 -1,-0.2 0.740 64.8 -15.3 -27.2 -60.1 5.3 -6.9 -19.4 12 13 A K E - D 0 29B 104 17,-1.1 17,-2.5 42,-0.2 2,-0.3 -0.959 57.2-151.4-146.3 161.9 2.4 -4.5 -18.6 13 14 A V E - D 0 28B 21 -2,-0.3 15,-0.3 15,-0.3 41,-0.1 -0.963 6.8-175.0-135.7 146.2 1.1 -2.6 -15.5 14 15 A H + 0 0 83 13,-2.7 14,-0.2 -2,-0.3 -1,-0.1 0.573 54.4 88.5-123.4 -20.0 -2.6 -1.7 -15.0 15 16 A V - 0 0 18 12,-1.0 2,-0.3 4,-0.1 -2,-0.1 -0.303 47.8-175.1 -74.7 165.9 -2.6 0.4 -11.8 16 17 A K > - 0 0 139 -2,-0.1 3,-2.1 33,-0.1 31,-0.3 -0.936 44.3 -76.6-147.6 159.7 -2.1 4.2 -11.5 17 18 A A T 3 S+ 0 0 51 -2,-0.3 31,-0.2 1,-0.3 3,-0.1 -0.367 122.4 28.2 -55.4 138.1 -1.9 6.5 -8.4 18 19 A G T 3 S+ 0 0 58 29,-3.0 -1,-0.3 1,-0.3 30,-0.1 0.273 94.0 125.9 86.1 -8.1 -5.4 6.9 -7.0 19 20 A D < - 0 0 57 -3,-2.1 28,-2.7 28,-0.2 2,-0.4 -0.336 58.6-123.5 -71.7 163.7 -6.6 3.5 -8.3 20 21 A Q E -F 46 0C 101 26,-0.2 2,-0.3 -3,-0.1 26,-0.2 -0.913 27.0-176.6-108.6 136.8 -8.2 0.9 -6.0 21 22 A I E -F 45 0C 0 24,-2.7 24,-2.3 -2,-0.4 2,-0.3 -0.907 8.2-160.7-127.1 159.3 -6.9 -2.6 -5.6 22 23 A E > - 0 0 130 -2,-0.3 3,-2.9 22,-0.3 19,-0.4 -0.964 44.7 -77.3-137.6 144.4 -8.2 -5.6 -3.6 23 24 A K T 3 S+ 0 0 153 -2,-0.3 19,-0.2 1,-0.3 3,-0.1 -0.230 121.5 14.6 -50.0 123.2 -6.2 -8.7 -2.5 24 25 A G T 3 S+ 0 0 51 17,-2.4 -1,-0.3 1,-0.4 2,-0.1 0.267 91.4 133.0 90.4 -8.0 -5.9 -11.0 -5.6 25 26 A Q < - 0 0 77 -3,-2.9 16,-2.5 16,-0.1 -1,-0.4 -0.500 67.8-102.9 -64.7 141.4 -7.0 -8.3 -8.2 26 27 A E E + E 0 40B 102 14,-0.2 14,-0.3 -2,-0.1 3,-0.1 -0.448 47.8 164.5 -67.9 143.2 -4.6 -8.2 -11.2 27 28 A V E - 0 0 0 12,-3.0 -13,-2.7 1,-0.5 -12,-1.0 0.582 60.6 -12.6-134.4 -37.4 -2.1 -5.3 -11.0 28 29 A A E -DE 13 39B 0 11,-2.2 11,-2.9 -15,-0.3 -1,-0.5 -0.909 56.3-123.8-155.3-179.7 0.6 -6.2 -13.6 29 30 A I E -DE 12 38B 28 -17,-2.5 -17,-1.1 9,-0.3 2,-0.4 -0.986 19.2-153.1-135.6 142.9 2.0 -9.0 -15.8 30 31 A L E - E 0 37B 0 7,-2.9 7,-2.7 -2,-0.3 2,-0.5 -0.943 4.6-148.5-119.1 134.1 5.7 -10.2 -15.7 31 32 A E E +DE 9 36B 91 -22,-3.2 -22,-2.3 -2,-0.4 2,-0.3 -0.935 43.6 120.5-103.7 124.9 7.5 -11.9 -18.7 32 33 A S E > + E 0 35B 32 3,-2.1 3,-2.1 -2,-0.5 -24,-0.1 -0.936 53.8 39.5-169.2 166.8 10.1 -14.5 -17.7 33 34 A M T 3 S- 0 0 134 1,-0.3 3,-0.1 -2,-0.3 -25,-0.0 0.796 127.6 -68.5 55.4 31.0 10.9 -18.2 -18.2 34 35 A K T 3 S+ 0 0 211 1,-0.2 -1,-0.3 0, 0.0 2,-0.3 0.801 122.0 87.1 51.8 35.1 9.7 -17.7 -21.9 35 36 A M E < S-E 32 0B 128 -3,-2.1 -3,-2.1 2,-0.0 2,-0.4 -0.871 77.9-116.6-142.3 173.5 6.1 -17.2 -20.4 36 37 A E E -E 31 0B 108 -2,-0.3 -5,-0.2 -5,-0.2 -7,-0.0 -0.954 26.9-167.9-119.2 143.5 3.9 -14.4 -19.0 37 38 A I E -E 30 0B 41 -7,-2.7 -7,-2.9 -2,-0.4 2,-0.1 -0.996 21.2-120.4-135.6 127.4 2.8 -14.6 -15.4 38 39 A P E -E 29 0B 80 0, 0.0 2,-0.4 0, 0.0 -9,-0.3 -0.433 19.7-151.6 -69.7 150.3 0.1 -12.4 -13.8 39 40 A I E -E 28 0B 1 -11,-2.9 -12,-3.0 -2,-0.1 -11,-2.2 -0.987 18.6-171.0-124.8 132.3 1.0 -10.2 -10.8 40 41 A V E -E 26 0B 60 -2,-0.4 2,-0.4 -14,-0.3 -14,-0.2 -0.742 33.6 -82.0-124.4 162.2 -1.7 -9.3 -8.2 41 42 A A - 0 0 2 -16,-2.5 -17,-2.4 -19,-0.4 -16,-0.1 -0.550 28.2-156.1 -63.2 122.6 -2.3 -7.1 -5.2 42 43 A D S S+ 0 0 94 -2,-0.4 2,-0.3 1,-0.2 -1,-0.2 0.726 82.1 4.1 -71.5 -22.4 -0.8 -8.8 -2.1 43 44 A R S S- 0 0 119 -21,-0.1 -1,-0.2 -18,-0.1 -19,-0.1 -0.970 87.4 -96.0-154.8 157.7 -3.4 -6.7 -0.1 44 45 A S + 0 0 64 -2,-0.3 -22,-0.3 -3,-0.1 2,-0.3 -0.353 60.4 112.3 -69.8 155.6 -6.2 -4.3 -0.8 45 46 A G E -F 21 0C 13 -24,-2.3 -24,-2.7 -2,-0.1 2,-0.4 -0.911 66.7 -72.6 165.1 176.9 -5.7 -0.5 -0.7 46 47 A I E -F 20 0C 63 -2,-0.3 22,-1.9 -26,-0.2 2,-0.8 -0.825 54.5-111.8 -88.7 135.2 -5.6 2.8 -2.7 47 48 A V E -B 67 0A 1 -28,-2.7 -29,-3.0 -2,-0.4 20,-0.3 -0.593 35.8-179.6 -68.6 106.4 -2.5 3.0 -4.9 48 49 A K E - 0 0 124 18,-1.7 2,-0.3 -2,-0.8 19,-0.2 0.886 69.0 -14.8 -74.3 -40.9 -0.5 5.8 -3.3 49 50 A E E -B 66 0A 92 17,-2.2 17,-2.8 -3,-0.1 2,-0.4 -0.977 57.4-133.5-156.3 161.5 2.3 5.4 -5.9 50 51 A V E -B 65 0A 40 -2,-0.3 15,-0.3 15,-0.3 -33,-0.1 -0.981 11.5-167.8-122.3 132.8 3.6 3.0 -8.6 51 52 A K + 0 0 108 13,-2.6 2,-0.2 -2,-0.4 14,-0.2 0.372 66.2 41.6-103.2 -1.3 7.3 2.3 -8.7 52 53 A K - 0 0 38 12,-0.7 2,-0.3 4,-0.0 12,-0.1 -0.786 62.2-150.2-139.8 176.2 7.6 0.6 -12.1 53 54 A K > - 0 0 124 -2,-0.2 3,-1.7 -41,-0.0 -43,-0.2 -0.914 42.7 -62.8-144.7 169.8 6.4 0.8 -15.7 54 55 A E T 3 S+ 0 0 111 -2,-0.3 -43,-0.2 1,-0.2 -42,-0.2 -0.298 119.3 9.4 -54.8 133.7 5.6 -1.5 -18.7 55 56 A G T 3 S+ 0 0 41 -45,-2.2 -1,-0.2 1,-0.2 -44,-0.2 0.397 92.4 138.9 76.0 -0.6 8.7 -3.3 -20.0 56 57 A D < - 0 0 57 -3,-1.7 -46,-3.0 -46,-0.5 -1,-0.2 -0.395 61.6 -99.9 -71.4 153.1 11.0 -2.3 -17.0 57 58 A F E -C 9 0B 123 -48,-0.2 2,-0.3 -2,-0.1 -48,-0.2 -0.487 47.1-177.5 -66.5 142.9 13.4 -4.8 -15.5 58 59 A V E -C 8 0B 0 -50,-2.3 -50,-2.3 -2,-0.2 2,-0.3 -0.950 7.9-167.5-144.3 160.1 12.2 -6.4 -12.2 59 60 A N > - 0 0 66 -2,-0.3 3,-2.4 -52,-0.3 2,-0.4 -0.895 42.2 -67.1-144.1 167.3 13.5 -8.8 -9.7 60 61 A E T 3 S+ 0 0 150 1,-0.3 -55,-0.3 -2,-0.3 3,-0.1 -0.485 126.3 8.5 -61.4 113.5 12.5 -11.0 -6.7 61 62 A G T 3 S+ 0 0 53 -57,-2.6 2,-0.4 -2,-0.4 -1,-0.3 0.415 91.6 142.4 90.9 1.7 11.6 -8.5 -4.0 62 63 A D < - 0 0 49 -3,-2.4 -58,-2.9 -56,-0.2 -1,-0.3 -0.631 58.2-110.0 -76.9 126.6 11.7 -5.4 -6.3 63 64 A V E +A 3 0A 49 -2,-0.4 -60,-0.3 -60,-0.3 3,-0.1 -0.277 35.8 178.2 -63.6 144.3 8.9 -3.0 -5.4 64 65 A L E - 0 0 0 -62,-3.1 -13,-2.6 1,-0.4 -12,-0.7 0.744 62.8 -14.2-109.9 -48.2 6.0 -2.6 -7.8 65 66 A L E -AB 2 50A 0 -63,-2.2 -63,-2.2 -15,-0.3 -1,-0.4 -0.947 52.5-131.2-153.0 170.9 3.7 -0.1 -5.9 66 67 A E E - B 0 49A 76 -17,-2.8 -17,-2.2 -2,-0.3 -18,-1.7 -0.954 24.4-150.4-130.7 148.6 2.9 1.6 -2.6 67 68 A L E - B 0 47A 18 -2,-0.3 -20,-0.2 -20,-0.3 -22,-0.1 -0.654 27.5 -75.3-120.3 165.6 -0.5 1.9 -0.9 68 69 A S - 0 0 31 -22,-1.9 2,-0.2 -2,-0.2 -1,-0.2 -0.185 51.2-106.4 -54.3 147.3 -2.5 4.3 1.4 69 70 A N > - 0 0 100 1,-0.1 3,-2.1 -24,-0.0 -1,-0.1 -0.517 34.0-106.9 -74.2 152.9 -1.6 4.3 5.1 70 71 A S T 3 S+ 0 0 119 1,-0.3 -1,-0.1 2,-0.2 -2,-0.1 0.652 115.9 67.5 -58.8 -20.5 -4.2 2.6 7.4 71 72 A T T 3 0 0 123 1,-0.2 -1,-0.3 0, 0.0 -3,-0.0 0.756 360.0 360.0 -68.2 -28.7 -5.4 6.1 8.7 72 73 A Q < 0 0 167 -3,-2.1 -2,-0.2 0, 0.0 -1,-0.2 0.925 360.0 360.0 -71.7 360.0 -6.9 6.9 5.2