==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 26-NOV-08 2ZW1 . COMPND 2 MOLECULE: PROTEIN LG; . SOURCE 2 ORGANISM_SCIENTIFIC: FINEGOLDIA MAGNA; . AUTHOR H.WATANABE,H.MATSUMARU,T.ODAHARA,K.SUTO,S.HONDA . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3870.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 73.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 10.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 26.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 21.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A M 0 0 149 0, 0.0 2,-0.3 0, 0.0 21,-0.2 0.000 360.0 360.0 360.0 158.1 -2.0 20.8 18.2 2 1 A D E -A 21 0A 73 19,-1.7 19,-2.9 21,-0.1 2,-0.4 -0.971 360.0-105.4-152.6 164.9 1.2 20.3 16.4 3 2 A T E -A 20 0A 73 -2,-0.3 2,-0.3 17,-0.2 17,-0.2 -0.810 31.1-168.2 -90.9 129.2 2.7 18.8 13.2 4 3 A Y E -A 19 0A 11 15,-3.1 15,-2.4 -2,-0.4 2,-0.3 -0.872 6.7-150.2-113.7 148.8 4.5 15.5 13.3 5 4 A K E -Ab 18 52A 58 46,-2.3 48,-3.3 -2,-0.3 2,-0.4 -0.896 3.2-156.9-118.6 146.5 6.6 14.1 10.5 6 5 A L E -Ab 17 53A 0 11,-2.6 11,-2.0 -2,-0.3 2,-0.5 -0.999 4.0-162.0-120.6 127.3 7.3 10.5 9.6 7 6 A I E -Ab 16 54A 51 46,-2.5 48,-2.5 -2,-0.4 2,-0.7 -0.936 8.3-154.8-101.0 125.3 10.4 9.6 7.6 8 7 A L E -Ab 15 55A 3 7,-3.1 7,-2.4 -2,-0.5 2,-0.8 -0.917 10.5-174.9-102.2 110.6 10.2 6.1 6.0 9 8 A N E +Ab 14 56A 59 46,-3.3 48,-2.7 -2,-0.7 5,-0.2 -0.759 27.5 163.5-105.8 83.5 13.7 4.7 5.5 10 9 A G - 0 0 1 3,-2.6 30,-0.1 -2,-0.8 29,-0.0 -0.472 53.9-109.3-105.6 167.1 12.7 1.6 3.6 11 10 A K S S+ 0 0 152 1,-0.2 3,-0.1 -2,-0.2 -1,-0.1 0.762 118.6 7.4 -70.2 -24.2 14.4 -1.0 1.4 12 11 A T S S+ 0 0 145 1,-0.3 2,-0.5 0, 0.0 -1,-0.2 0.587 125.3 63.7-126.3 -24.5 12.6 0.3 -1.6 13 12 A L - 0 0 63 26,-0.1 -3,-2.6 25,-0.1 2,-0.5 -0.906 48.3-178.5-109.7 126.4 10.8 3.4 -0.4 14 13 A K E +A 9 0A 143 -2,-0.5 2,-0.3 -5,-0.2 -5,-0.2 -0.988 38.0 141.8-106.8 116.6 12.4 6.5 0.9 15 14 A G E -A 8 0A 21 -7,-2.4 -7,-3.1 -2,-0.5 2,-0.3 -0.924 38.6-149.5-152.7 170.9 9.5 8.8 1.9 16 15 A E E +A 7 0A 118 -2,-0.3 2,-0.3 -9,-0.2 -9,-0.2 -0.986 13.9 168.1-138.7 150.3 7.9 11.3 4.2 17 16 A T E -A 6 0A 37 -11,-2.0 -11,-2.6 -2,-0.3 2,-0.3 -0.933 15.9-149.5-146.8 171.4 4.5 12.3 5.3 18 17 A T E -A 5 0A 82 -2,-0.3 2,-0.3 -13,-0.2 -13,-0.2 -0.932 7.7-171.1-136.9 162.6 3.1 14.5 8.1 19 18 A T E -A 4 0A 37 -15,-2.4 -15,-3.1 -2,-0.3 2,-0.5 -0.977 23.6-128.1-147.2 149.3 0.1 14.7 10.3 20 19 A E E +A 3 0A 142 -2,-0.3 2,-0.3 -17,-0.2 -17,-0.2 -0.887 42.6 165.8 -90.7 134.2 -1.4 17.2 12.8 21 20 A A E -A 2 0A 4 -19,-2.9 -19,-1.7 -2,-0.5 3,-0.1 -0.984 48.4-120.9-149.6 158.6 -2.1 15.6 16.1 22 21 A V S S- 0 0 92 -2,-0.3 2,-0.3 -21,-0.2 -1,-0.1 0.806 94.0 -6.2 -66.8 -34.8 -2.8 16.5 19.8 23 22 A D S > S- 0 0 74 -21,-0.1 4,-2.1 1,-0.1 3,-0.2 -0.939 76.0 -95.1-153.8 175.9 0.2 14.6 21.0 24 23 A A H > S+ 0 0 32 -2,-0.3 4,-2.9 1,-0.2 5,-0.1 0.850 117.5 54.3 -66.5 -40.3 3.1 12.4 20.0 25 24 A A H > S+ 0 0 51 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.844 108.4 51.1 -68.0 -30.1 1.4 9.1 20.9 26 25 A T H > S+ 0 0 49 2,-0.2 4,-1.9 1,-0.2 -2,-0.2 0.950 112.2 45.8 -69.4 -47.2 -1.6 10.0 18.7 27 26 A A H X S+ 0 0 0 -4,-2.1 4,-3.1 1,-0.2 -2,-0.2 0.905 109.0 57.5 -59.1 -43.7 0.8 10.8 15.8 28 27 A E H X S+ 0 0 68 -4,-2.9 4,-2.6 1,-0.2 -1,-0.2 0.893 105.4 49.2 -51.9 -47.0 2.7 7.6 16.5 29 28 A K H X S+ 0 0 155 -4,-1.6 4,-1.7 2,-0.2 -1,-0.2 0.922 111.6 49.0 -64.2 -42.7 -0.5 5.5 16.1 30 29 A V H X S+ 0 0 67 -4,-1.9 4,-2.4 1,-0.2 -2,-0.2 0.934 114.7 46.0 -58.9 -49.5 -1.3 7.2 12.8 31 30 A F H X S+ 0 0 2 -4,-3.1 4,-2.9 2,-0.2 -2,-0.2 0.830 104.6 58.8 -65.8 -34.8 2.2 6.6 11.6 32 31 A K H X S+ 0 0 85 -4,-2.6 4,-1.8 1,-0.2 -1,-0.2 0.932 112.3 42.0 -62.4 -40.9 2.5 3.0 12.6 33 32 A H H X S+ 0 0 113 -4,-1.7 4,-2.9 2,-0.2 -2,-0.2 0.922 112.1 54.6 -70.2 -44.6 -0.5 2.2 10.4 34 33 A Y H X S+ 0 0 63 -4,-2.4 4,-1.7 1,-0.2 -2,-0.2 0.930 108.2 49.2 -53.3 -49.3 0.8 4.5 7.6 35 34 A A H <>S+ 0 0 2 -4,-2.9 5,-2.5 2,-0.2 -1,-0.2 0.916 111.1 49.0 -59.9 -44.6 4.1 2.6 7.5 36 35 A N H ><5S+ 0 0 110 -4,-1.8 3,-2.0 1,-0.2 -1,-0.2 0.924 107.2 55.4 -61.1 -43.8 2.4 -0.8 7.4 37 36 A E H 3<5S+ 0 0 123 -4,-2.9 -1,-0.2 1,-0.3 -2,-0.2 0.849 112.8 44.0 -52.5 -37.3 0.2 0.5 4.5 38 37 A H T 3<5S- 0 0 89 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.189 115.7-115.9 -95.9 12.3 3.4 1.3 2.7 39 38 A G T < 5 + 0 0 52 -3,-2.0 2,-0.6 1,-0.2 -3,-0.2 0.770 67.5 139.1 56.9 35.4 5.2 -1.9 3.6 40 39 A V < + 0 0 5 -5,-2.5 2,-0.4 -6,-0.1 -1,-0.2 -0.953 23.3 169.4-110.7 119.2 7.9 -0.3 5.6 41 40 A H + 0 0 144 -2,-0.6 2,-0.3 -3,-0.1 14,-0.0 -0.993 24.9 69.7-134.5 125.6 8.7 -2.4 8.7 42 41 A G S S+ 0 0 26 -2,-0.4 2,-0.3 -32,-0.0 15,-0.2 -0.877 72.8 6.4 170.2-136.2 11.5 -2.0 11.1 43 42 A H E -C 56 0A 142 13,-2.8 13,-2.3 -2,-0.3 2,-0.4 -0.616 55.1-150.5 -91.8 133.2 13.1 0.1 13.9 44 43 A W E +C 55 0A 73 -2,-0.3 2,-0.3 11,-0.2 11,-0.2 -0.837 18.3 169.7-106.7 139.7 11.3 3.1 15.3 45 44 A T E -C 54 0A 89 9,-2.1 9,-2.4 -2,-0.4 2,-0.4 -0.965 15.7-154.1-136.1 158.6 12.8 6.3 16.7 46 45 A Y E -C 53 0A 74 -2,-0.3 7,-0.2 7,-0.2 5,-0.0 -1.000 1.5-161.5-135.9 134.0 11.3 9.6 17.7 47 46 A D E >>> -C 52 0A 76 5,-2.5 5,-1.9 -2,-0.4 3,-1.0 -0.935 2.3-165.2-116.9 104.2 13.0 13.0 17.9 48 47 A P T 345S+ 0 0 85 0, 0.0 3,-0.5 0, 0.0 -1,-0.1 0.808 82.2 66.9 -61.0 -28.6 11.1 15.5 20.0 49 48 A E T 345S+ 0 0 175 1,-0.2 -2,-0.0 3,-0.1 0, 0.0 0.783 119.8 20.5 -59.9 -34.4 13.1 18.6 18.6 50 49 A T T <45S- 0 0 89 -3,-1.0 -1,-0.2 2,-0.1 -45,-0.2 0.160 104.8-122.9-117.8 13.6 11.7 18.2 15.1 51 50 A K T <5 + 0 0 69 -4,-0.6 -46,-2.3 -3,-0.5 2,-0.5 0.914 62.5 152.5 42.9 53.2 8.7 16.2 16.2 52 51 A T E < -bC 5 47A 13 -5,-1.9 -5,-2.5 -48,-0.2 2,-0.4 -0.969 36.8-162.1-124.5 124.4 9.9 13.5 13.8 53 52 A F E -bC 6 46A 6 -48,-3.3 -46,-2.5 -2,-0.5 2,-0.4 -0.802 11.0-162.8 -93.8 141.8 9.4 9.7 13.8 54 53 A T E -bC 7 45A 30 -9,-2.4 -9,-2.1 -2,-0.4 2,-0.5 -0.992 7.4-165.5-125.4 135.8 11.7 7.6 11.7 55 54 A V E -bC 8 44A 0 -48,-2.5 -46,-3.3 -2,-0.4 2,-0.4 -0.988 14.6-167.1-118.0 126.5 11.0 4.0 10.7 56 55 A T E bC 9 43A 42 -13,-2.3 -13,-2.8 -2,-0.5 -46,-0.2 -0.956 360.0 360.0-123.9 125.0 14.1 2.2 9.4 57 56 A E 0 0 83 -48,-2.7 -47,-0.2 -2,-0.4 -1,-0.1 0.853 360.0 360.0 -82.5 360.0 14.2 -1.2 7.6