data_bmst000033 save_entry_information _Entry.Sf_category entry_information _Entry.Sf_framecode entry_information _Entry.ID bmst000033 _Entry.Title ATP _Entry.Version_type update _Entry.Submission_date 2006-02-23 _Entry.Accession_date 2006-02-23 _Entry.Last_release_date 2011-09-14 _Entry.Original_release_date 2006-02-23 _Entry.Origination author _Entry.NMR_STAR_version 3.1.1.7 _Entry.Original_NMR_STAR_version 'NMR STAR v3.1' _Entry.Experimental_method NMR _Entry.Experimental_method_subtype theoretical _Entry.Details ? _Entry.BMRB_internal_directory_name ATP loop_ _Entry_author.Ordinal _Entry_author.Given_name _Entry_author.Family_name _Entry_author.Middle_initials _Entry_author.Family_title _Entry_author.Entry_ID 1 William Westler M. ? bmst000033 2 John Markley L. ? bmst000033 stop_ loop_ _Entry_src.ID _Entry_src.Project_name _Entry_src.Organization_full_name _Entry_src.Organization_initials _Entry_src.Entry_ID 1 metabolics "Madison Metabolomics Consortium" MMC bmst000033 stop_ loop_ _Data_set.Type _Data_set.Count _Data_set.Entry_ID other_data_list 1 bmst000033 stop_ loop_ _Datum.Type _Datum.Count _Datum.Entry_ID "theoretical chemical shifts" 1 bmst000033 stop_ loop_ _Release.Release_number _Release.Date _Release.Submission_date _Release.Type _Release.Author _Release.Detail _Release.Entry_ID 1 2006-02-23 2006-02-23 original BMRB "Original theoretical calculations from NMRFAM" bmst000033 2 2008-11-18 2008-11-18 update BMRB "updated the file to match latest NMR STAR dictionary" bmst000033 3 2008-11-25 2008-11-25 update BMRB "fixed enumerations: N should be no" bmst000033 4 2010-09-16 2010-09-16 update BMRB "Removed Shielding_tensor_list_ID and Shielding_tensor_list_label from theoretical_chem_shifts" bmst000033 5 2011-09-14 2011-09-14 update BMRB "Partially brought up to date with latest Dictionary" bmst000033 stop_ save_ save_citations _Citation.Sf_category citations _Citation.Sf_framecode citations _Citation.Entry_ID bmst000033 _Citation.ID 1 _Citation.Class 'reference citation' _Citation.PubMed_ID 18940862 _Citation.Title 'Database resources of the National Center for Biotechnology Information.' _Citation.Status published _Citation.Type internet _Citation.WWW_URL http://pubchem.ncbi.nlm.nih.gov/ _Citation.Year 2006 _Citation.Details ? loop_ _Citation_author.Ordinal _Citation_author.Given_name _Citation_author.Family_name _Citation_author.First_initial _Citation_author.Middle_initials _Citation_author.Family_title _Citation_author.Entry_ID _Citation_author.Citation_ID 1 D. Wheeler D. L. ? bmst000033 1 2 T. Barrett T. ? ? bmst000033 1 3 D. Benson D. A. ? bmst000033 1 4 S. Bryant S. H. ? bmst000033 1 5 K. Canese K. ? ? bmst000033 1 6 V. Chetvenin V. ? ? bmst000033 1 7 D. Church D. M. ? bmst000033 1 8 M. DiCuccio M. ? ? bmst000033 1 9 R. Edgar R. ? ? bmst000033 1 10 S. Federhen S. ? ? bmst000033 1 11 L. Geer L. Y. ? bmst000033 1 12 W. Helmberg W. ? ? bmst000033 1 13 Y. Kapustin Y. ? ? bmst000033 1 14 D. Kenton D. L. ? bmst000033 1 15 O. Khovayko O. ? ? bmst000033 1 16 D. Lipman D. J. ? bmst000033 1 17 T. Madden T. L. ? bmst000033 1 18 D. Maglott D. R. ? bmst000033 1 19 J. Ostell J. ? ? bmst000033 1 20 K. Pruitt K. D. ? bmst000033 1 21 G. Schuler G. D. ? bmst000033 1 22 L. Schriml L. M. ? bmst000033 1 23 E. Sequeira E. ? ? bmst000033 1 24 S. Sherry S. T. ? bmst000033 1 25 K. Sirotkin K. ? ? bmst000033 1 26 A. Souvorov A. ? ? bmst000033 1 27 G. Starchenko G. ? ? bmst000033 1 28 T. Suzek T. O. ? bmst000033 1 29 R. Tatusov R. ? ? bmst000033 1 30 T. Tatusova T. A. ? bmst000033 1 31 L. Bagner L. ? ? bmst000033 1 32 E. Yaschenko E. ? ? bmst000033 1 stop_ save_ save_assembly _Assembly.Sf_category assembly _Assembly.Sf_framecode assembly _Assembly.Entry_ID bmst000033 _Assembly.ID 1 _Assembly.Name ASSEMBLY_NAME _Assembly.Number_of_components 1 _Assembly.Organic_ligands 0 _Assembly.Metal_ions ? _Assembly.Non_standard_bonds no _Assembly.Paramagnetic no _Assembly.Thiol_state 'not reported' loop_ _Entity_assembly.ID _Entity_assembly.Entity_assembly_name _Entity_assembly.Entity_ID _Entity_assembly.Entity_label _Entity_assembly.Experimental_data_reported _Entity_assembly.Physical_state _Entity_assembly.Conformational_isomer _Entity_assembly.Chemical_exchange_state _Entity_assembly.Magnetic_equivalence_group_code _Entity_assembly.Role _Entity_assembly.Details _Entity_assembly.Entry_ID _Entity_assembly.Assembly_ID 1 ENT_NAME 1 $ATP yes native no no ? ? ? bmst000033 1 stop_ save_ save_ATP _Entity.Sf_category entity _Entity.Sf_framecode ATP _Entity.Entry_ID bmst000033 _Entity.ID 1 _Entity.BMRB_code ? _Entity.Name ATP _Entity.Type non-polymer _Entity.Ambiguous_conformational_states no _Entity.Ambiguous_chem_comp_sites no _Entity.Nstd_monomer no _Entity.Nstd_chirality no _Entity.Nstd_linkage no _Entity.Paramagnetic no _Entity.Thiol_state 'not reported' loop_ _Entity_comp_index.ID _Entity_comp_index.Comp_ID _Entity_comp_index.Comp_label _Entity_comp_index.Entry_ID _Entity_comp_index.Entity_ID 1 1 $chem_comp_1 bmst000033 1 stop_ save_ save_chem_comp_1 _Chem_comp.Sf_category chem_comp _Chem_comp.Sf_framecode chem_comp_1 _Chem_comp.Entry_ID bmst000033 _Chem_comp.ID 1 _Chem_comp.Provenance PubChem _Chem_comp.Name ATP _Chem_comp.Type non-polymer _Chem_comp.BMRB_code ? _Chem_comp.PDB_code ? _Chem_comp.InCHi_code ; InChI=1/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1/f/h18-19,21,23H,11H2 ; _Chem_comp.Mon_nstd_flag ? _Chem_comp.Std_deriv_one_letter_code ? _Chem_comp.Std_deriv_three_letter_code ? _Chem_comp.Std_deriv_BMRB_code ? _Chem_comp.Std_deriv_PDB_code ? _Chem_comp.Formal_charge ? _Chem_comp.Paramagnetic no _Chem_comp.Aromatic yes _Chem_comp.Formula 'C10 H16 N5 O13 P3' _Chem_comp.Formula_weight 507.1810230000 _Chem_comp.Formula_mono_iso_wt_nat 506.995745157 _Chem_comp.Formula_mono_iso_wt_13C 517.029293535 _Chem_comp.Formula_mono_iso_wt_15N 511.980919623 _Chem_comp.Formula_mono_iso_wt_13C_15N 517.029293535 _Chem_comp.Image_file_name standards/ATP/lit/3304.png _Chem_comp.Image_file_format png _Chem_comp.Topo_file_name ? _Chem_comp.Topo_file_format ? _Chem_comp.Struct_file_name standards/ATP/lit/3304.mol _Chem_comp.Struct_file_format mol _Chem_comp.Stereochem_param_file_name ? _Chem_comp.Details ? _Chem_comp.DB_query_date ? _Chem_comp.DB_last_query_revised_last_date ? loop_ _Chem_comp_common_name.Name _Chem_comp_common_name.Type _Chem_comp_common_name.Entry_ID _Chem_comp_common_name.Comp_ID "Ado-5'-P-P-P" synonym bmst000033 1 Adynol synonym bmst000033 1 "Adenosine 5'-(tetrahydrogen triphosphate)" synonym bmst000033 1 Adetol synonym bmst000033 1 Atipi synonym bmst000033 1 "Triphosphoric acid adenosine ester" synonym bmst000033 1 Myotriphos synonym bmst000033 1 Glucobasin synonym bmst000033 1 "Adenylpyrophosphoric acid" synonym bmst000033 1 "ATP (nucleotide)" synonym bmst000033 1 Triadenyl synonym bmst000033 1 Ara-ATP synonym bmst000033 1 Striadyne synonym bmst000033 1 "5'-Atp" synonym bmst000033 1 Triphosphaden synonym bmst000033 1 ATP synonym bmst000033 1 "Adenosine, 5'-(tetrahydrogen triphosphate)" synonym bmst000033 1 Adenosintriphosphorsaeure synonym bmst000033 1 "Adenosine 5'-triphosphoric acid" synonym bmst000033 1 Atriphos synonym bmst000033 1 "Adenosine triphosphate" synonym bmst000033 1 Adephos synonym bmst000033 1 "9-beta-D-Arabinofuranosyladenine 5'-triphosphate" synonym bmst000033 1 Triphosaden synonym bmst000033 1 "Adenosine 5'-triphosphate" synonym bmst000033 1 "ADENOSINE-5'-PHOSPHATE" synonym bmst000033 1 stop_ loop_ _Chem_comp_systematic_name.Name _Chem_comp_systematic_name.Naming_system _Chem_comp_systematic_name.Entry_ID _Chem_comp_systematic_name.Comp_ID ; [[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxyphosphonic acid ; IUPAC bmst000033 1 ; [[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxyphosphonic acid ; IUPAC_TRADITIONAL bmst000033 1 ; [[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxyphosphonic acid ; IUPAC_CAS bmst000033 1 ; [[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxyphosphonic acid ; IUPAC_OPENEYE bmst000033 1 ; [[[(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxyphosphonic acid ; IUPAC_SYSTEMATIC bmst000033 1 stop_ loop_ _Chem_comp_SMILES.Type _Chem_comp_SMILES.String _Chem_comp_SMILES.Entry_ID _Chem_comp_SMILES.Comp_ID Isomeric C1=NC2=C(C(=N1)N)N=CN2[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O bmst000033 1 Canonical C1=NC2=C(C(=N1)N)N=CN2C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O bmst000033 1 stop_ loop_ _Chem_comp_atom.Atom_ID _Chem_comp_atom.Type_symbol _Chem_comp_atom.Stereo_config _Chem_comp_atom.Charge _Chem_comp_atom.Oxidation_number _Chem_comp_atom.Unpaired_electron_number _Chem_comp_atom.Drawing_2D_coord_x _Chem_comp_atom.Drawing_2D_coord_y _Chem_comp_atom.Model_Cartn_x _Chem_comp_atom.Model_Cartn_y _Chem_comp_atom.Model_Cartn_z _Chem_comp_atom.Entry_ID _Chem_comp_atom.Comp_ID C1 C ? ? ? ? 2.0000 -1.0551 -3.521 -4.423 -2.360 bmst000033 1 C2 C ? ? ? ? 5.2619 -1.5551 -1.152 -3.096 1.054 bmst000033 1 C3 C ? ? ? ? 6.7523 2.0939 1.874 -0.297 -0.745 bmst000033 1 C4 C ? ? ? ? 3.7321 -2.0551 -2.978 -3.681 0.147 bmst000033 1 C5 C ? ? ? ? 2.8660 -2.5551 -4.296 -4.019 -0.225 bmst000033 1 C6 C ? ? ? ? 3.7321 -1.0551 -2.014 -3.762 -0.862 bmst000033 1 C7 C ? ? ? ? 5.9423 1.5075 2.211 -1.775 -0.886 bmst000033 1 C8 C ? ? ? ? 4.9917 1.8182 2.031 -2.314 -2.322 bmst000033 1 C9 C ? ? ? ? 4.4025 1.0102 0.576 -2.807 -2.287 bmst000033 1 C10 C ? ? ? ? 4.9889 0.2002 0.509 -3.388 -0.855 bmst000033 1 N11 N ? ? ? ? 2.8660 -3.5551 -5.321 -4.005 0.659 bmst000033 1 N12 N ? ? ? ? 2.0000 -2.0551 -4.543 -4.388 -1.497 bmst000033 1 N13 N ? ? ? ? 2.8660 -0.5551 -2.234 -4.131 -2.137 bmst000033 1 N14 N ? ? ? ? 4.6783 -2.3598 -2.422 -3.259 1.340 bmst000033 1 N15 N ? ? ? ? 4.6783 -0.7504 -0.833 -3.373 -0.266 bmst000033 1 O16 O ? ? ? ? 4.6844 2.7698 2.865 -3.433 -2.563 bmst000033 1 O17 O ? ? ? ? 3.4025 1.0119 0.289 -3.700 -3.313 bmst000033 1 O18 O ? ? ? ? 12.7309 3.2145 -1.014 6.466 0.924 bmst000033 1 O19 O ? ? ? ? 12.5073 1.8181 0.087 5.287 -0.991 bmst000033 1 O20 O ? ? ? ? 9.0615 1.4619 0.807 -0.228 2.801 bmst000033 1 O21 O ? ? ? ? 10.6063 3.3629 2.754 4.089 1.974 bmst000033 1 O22 O ? ? ? ? 11.3345 3.4381 1.583 6.449 0.873 bmst000033 1 O23 O ? ? ? ? 7.8888 3.0820 -0.552 0.756 0.768 bmst000033 1 O24 O ? ? ? ? 9.7897 1.5372 1.836 3.136 -0.320 bmst000033 1 O25 O ? ? ? ? 5.9405 0.5075 1.333 -2.559 -0.054 bmst000033 1 O26 O ? ? ? ? 7.6651 1.6856 1.997 0.078 0.651 bmst000033 1 O27 O ? ? ? ? 11.1109 2.0417 0.282 4.299 1.354 bmst000033 1 O28 O ? ? ? ? 9.2852 2.8584 1.326 2.082 2.035 bmst000033 1 P29 P ? ? ? ? 11.9209 2.6281 0.337 5.730 0.524 bmst000033 1 P30 P ? ? ? ? 8.4752 2.2720 0.747 0.636 1.453 bmst000033 1 P31 P ? ? ? ? 10.1980 2.4500 1.616 3.370 1.132 bmst000033 1 H32 H ? ? ? ? 1.4631 -0.7451 -3.770 -4.727 -3.374 bmst000033 1 H33 H ? ? ? ? 5.8819 -1.5551 -0.388 -2.764 1.741 bmst000033 1 H34 H ? ? ? ? 7.0999 2.6073 2.584 0.326 -1.295 bmst000033 1 H35 H ? ? ? ? 6.3070 2.5254 0.861 -0.078 -1.090 bmst000033 1 H36 H ? ? ? ? 6.4942 1.2251 3.234 -1.946 -0.531 bmst000033 1 H37 H ? ? ? ? 5.4309 2.2558 2.172 -1.536 -3.085 bmst000033 1 H38 H ? ? ? ? 4.1220 1.5631 -0.080 -1.919 -2.309 bmst000033 1 H39 H ? ? ? ? 5.4266 -0.2390 0.887 -4.418 -0.857 bmst000033 1 H40 H ? ? ? ? 2.3291 -3.8651 -6.259 -4.127 0.306 bmst000033 1 H41 H ? ? ? ? 3.4030 -3.8651 -5.184 -3.596 1.570 bmst000033 1 H42 H ? ? ? ? 5.1000 3.2298 3.779 -3.120 -2.632 bmst000033 1 H43 H ? ? ? ? 3.0935 1.5494 -0.654 -3.960 -3.187 bmst000033 1 H44 H ? ? ? ? 13.2969 2.9613 -1.796 6.087 0.488 bmst000033 1 H45 H ? ? ? ? 12.2541 1.2521 0.676 4.525 -1.210 bmst000033 1 H46 H ? ? ? ? 8.8084 0.8960 -0.009 -0.123 3.321 bmst000033 1 H47 H ? ? ? ? 10.2428 3.8651 2.742 5.055 1.765 bmst000033 1 stop_ loop_ _Atom_nomenclature.Atom_ID _Atom_nomenclature.Atom_name _Atom_nomenclature.Naming_system _Atom_nomenclature.Entry_ID _Atom_nomenclature.Comp_ID C1 C1 ? bmst000033 1 C2 C2 ? bmst000033 1 C3 C3 ? bmst000033 1 C4 C4 ? bmst000033 1 C5 C5 ? bmst000033 1 C6 C6 ? bmst000033 1 C7 C7 ? bmst000033 1 C8 C8 ? bmst000033 1 C9 C9 ? bmst000033 1 C10 C10 ? bmst000033 1 N11 N11 ? bmst000033 1 N12 N12 ? bmst000033 1 N13 N13 ? bmst000033 1 N14 N14 ? bmst000033 1 N15 N15 ? bmst000033 1 O16 O16 ? bmst000033 1 O17 O17 ? bmst000033 1 O18 O18 ? bmst000033 1 O19 O19 ? bmst000033 1 O20 O20 ? bmst000033 1 O21 O21 ? bmst000033 1 O22 O22 ? bmst000033 1 O23 O23 ? bmst000033 1 O24 O24 ? bmst000033 1 O25 O25 ? bmst000033 1 O26 O26 ? bmst000033 1 O27 O27 ? bmst000033 1 O28 O28 ? bmst000033 1 P29 P29 ? bmst000033 1 P30 P30 ? bmst000033 1 P31 P31 ? bmst000033 1 H32 H32 ? bmst000033 1 H33 H33 ? bmst000033 1 H34 H34 ? bmst000033 1 H35 H35 ? bmst000033 1 H36 H36 ? bmst000033 1 H37 H37 ? bmst000033 1 H38 H38 ? bmst000033 1 H39 H39 ? bmst000033 1 H40 H40 ? bmst000033 1 H41 H41 ? bmst000033 1 H42 H42 ? bmst000033 1 H43 H43 ? bmst000033 1 H44 H44 ? bmst000033 1 H45 H45 ? bmst000033 1 H46 H46 ? bmst000033 1 H47 H47 ? bmst000033 1 stop_ loop_ _Chem_comp_bond.ID _Chem_comp_bond.Type _Chem_comp_bond.Value_order _Chem_comp_bond.Atom_ID_1 _Chem_comp_bond.Atom_ID_2 _Chem_comp_bond.Details _Chem_comp_bond.Entry_ID _Chem_comp_bond.Comp_ID 1 covalent DOUB C1 N12 ? bmst000033 1 2 covalent SING C1 N13 ? bmst000033 1 3 covalent SING C1 H32 ? bmst000033 1 4 covalent DOUB C2 N14 ? bmst000033 1 5 covalent SING C2 N15 ? bmst000033 1 6 covalent SING C2 H33 ? bmst000033 1 7 covalent SING C7 C3 ? bmst000033 1 8 covalent SING C3 O26 ? bmst000033 1 9 covalent SING C3 H34 ? bmst000033 1 10 covalent SING C3 H35 ? bmst000033 1 11 covalent DOUB C4 C5 ? bmst000033 1 12 covalent SING C4 C6 ? bmst000033 1 13 covalent SING C4 N14 ? bmst000033 1 14 covalent SING C5 N11 ? bmst000033 1 15 covalent SING C5 N12 ? bmst000033 1 16 covalent DOUB C6 N13 ? bmst000033 1 17 covalent SING C6 N15 ? bmst000033 1 18 covalent SING C7 C8 ? bmst000033 1 19 covalent SING C7 O25 ? bmst000033 1 20 covalent SING C7 H36 ? bmst000033 1 21 covalent SING C8 C9 ? bmst000033 1 22 covalent SING C8 O16 ? bmst000033 1 23 covalent SING C8 H37 ? bmst000033 1 24 covalent SING C9 C10 ? bmst000033 1 25 covalent SING C9 O17 ? bmst000033 1 26 covalent SING C9 H38 ? bmst000033 1 27 covalent SING C10 N15 ? bmst000033 1 28 covalent SING C10 O25 ? bmst000033 1 29 covalent SING C10 H39 ? bmst000033 1 30 covalent SING N11 H40 ? bmst000033 1 31 covalent SING N11 H41 ? bmst000033 1 32 covalent SING O16 H42 ? bmst000033 1 33 covalent SING O17 H43 ? bmst000033 1 34 covalent SING O18 P29 ? bmst000033 1 35 covalent SING O18 H44 ? bmst000033 1 36 covalent SING O19 P29 ? bmst000033 1 37 covalent SING O19 H45 ? bmst000033 1 38 covalent SING O20 P30 ? bmst000033 1 39 covalent SING O20 H46 ? bmst000033 1 40 covalent SING O21 P31 ? bmst000033 1 41 covalent SING O21 H47 ? bmst000033 1 42 covalent DOUB O22 P29 ? bmst000033 1 43 covalent DOUB O23 P30 ? bmst000033 1 44 covalent DOUB O24 P31 ? bmst000033 1 45 covalent SING O26 P30 ? bmst000033 1 46 covalent SING O27 P29 ? bmst000033 1 47 covalent SING O27 P31 ? bmst000033 1 48 covalent SING O28 P30 ? bmst000033 1 49 covalent SING O28 P31 ? bmst000033 1 stop_ loop_ _Chem_comp_db_link.Author_supplied _Chem_comp_db_link.Database_code _Chem_comp_db_link.Accession_code _Chem_comp_db_link.Accession_code_type _Chem_comp_db_link.Entry_mol_code _Chem_comp_db_link.Entry_mol_name _Chem_comp_db_link.Entry_experimental_method _Chem_comp_db_link.Entry_relation_type _Chem_comp_db_link.Entry_details _Chem_comp_db_link.Entry_ID _Chem_comp_db_link.Comp_ID no PubChem 148785 sid ? ATP ? "matching entry" ? bmst000033 1 no PubChem 5957 cid ? ATP ? "matching entry" ? bmst000033 1 no PubChem 3304 sid ? ATP ? "matching entry" ? bmst000033 1 no KEGG C00002 "compound ID" ? ATP ? "matching entry" ? bmst000033 1 no "CAS Registry" 10168-83-9 "registry number" ? ATP ? "matching entry" ? bmst000033 1 no "CAS Registry" 16488-07-6 "registry number" ? ATP ? "matching entry" ? bmst000033 1 no "CAS Registry" 51569-41-6 "registry number" ? ATP ? "matching entry" ? bmst000033 1 no "CAS Registry" 56-65-5 "registry number" ? ATP ? "matching entry" ? bmst000033 1 no "CAS Registry" 71800-44-7 "registry number" ? ATP ? "matching entry" ? bmst000033 1 no "CAS Registry" 84412-18-0 "registry number" ? ATP ? "matching entry" ? bmst000033 1 no CHEBI 15422 ? ? ATP ? "matching entry" ? bmst000033 1 no EINECS 200-283-2 ? ? ATP ? "matching entry" ? bmst000033 1 stop_ loop_ _Chem_comp_citation.Citation_ID _Chem_comp_citation.Citation_label _Chem_comp_citation.Entry_ID _Chem_comp_citation.Comp_ID 1 $citations bmst000033 1 stop_ save_ save_software_1 _Software.Sf_category software _Software.Sf_framecode software_1 _Software.Entry_ID bmst000033 _Software.ID 1 _Software.Name Gaussian _Software.Version ? _Software.Details ? loop_ _Vendor.Name _Vendor.Address _Vendor.Electronic_address _Vendor.Entry_ID _Vendor.Software_ID "Gaussian, Inc." ? http://www.gaussian.com/home.htm bmst000033 1 stop_ loop_ _Task.Task _Task.Entry_ID _Task.Software_ID "geometry optimization" bmst000033 1 "chemical shift calculation" bmst000033 1 stop_ save_ save_chem_shift_reference _Chem_shift_reference.Sf_category chem_shift_reference _Chem_shift_reference.Sf_framecode chem_shift_reference _Chem_shift_reference.Entry_ID bmst000033 _Chem_shift_reference.ID 1 _Chem_shift_reference.Details ? loop_ _Chem_shift_ref.Atom_type _Chem_shift_ref.Atom_isotope_number _Chem_shift_ref.Mol_common_name _Chem_shift_ref.Atom_group _Chem_shift_ref.Chem_shift_units _Chem_shift_ref.Chem_shift_val _Chem_shift_ref.Ref_method _Chem_shift_ref.Ref_type _Chem_shift_ref.Indirect_shift_ratio _Chem_shift_ref.Entry_ID _Chem_shift_ref.Chem_shift_reference_ID H 1 TMS "methyl protons" ppm 0.00 na direct ? bmst000033 1 C 13 TMS "methyl carbons" ppm 0.00 na direct ? bmst000033 1 N 15 "ammonia pentamer" nitrogen ppm 0.00 na direct ? bmst000033 1 P 31 "phosphoric acid" phosphorus ppm 0.00 na direct ? bmst000033 1 stop_ save_ save_chem_shifts_calc_type _Chem_shifts_calc_type.Sf_category chem_shifts_calc_type _Chem_shifts_calc_type.Sf_framecode chem_shifts_calc_type _Chem_shifts_calc_type.Entry_ID bmst000033 _Chem_shifts_calc_type.ID 1 _Chem_shifts_calc_type.Calculation_level 'Density Functional Theory' _Chem_shifts_calc_type.Quantum_mechanical_method GIAO _Chem_shifts_calc_type.Quantum_mechanical_theory_level B3LYP _Chem_shifts_calc_type.Quantum_mechanical_basis_set 3-21g** _Chem_shifts_calc_type.Chem_shift_nucleus ? _Chem_shifts_calc_type.Chem_shift_reference_ID 1 _Chem_shifts_calc_type.Chem_shift_reference_label $chem_shift_reference _Chem_shifts_calc_type.Details ; Theoretical Chemical shift referencing and correction: 1H chemical shifts Tetramethylsilane (TMS) was geometry optimized at the B3LYP/6-311+g* level of theory. The chemical shielding of TMS was calculated at the pbe1pbe/3-21g* level of theory using the GIAO method. The chemical shielding of TMS was used as the reference (0 ppm) to obtain all other chemical shifts. A series of small organic molecules were optimized and the chemical shieldings were calculated in the same manner as that for TMS. To correct for biases arising from the applied level of theory, especially the bias from the small basis set size, a linear regression analysis was used. The slope and intercept from this regression was used to correct the calculated chemical shifts. The chemical shift was calculated by subtracting the chemical shielding value of the compound of interest from that of TMS and applying the slope and intercept corrections obtained from the regression analysis. corrected_shift=((TMS_shielding - uncorrected_shielding)+1.006)/0.963 13C chemical shifts: Tetramethylsilane (TMS) was geometry optimized at the B3LYP/6-311+g* level of theory. The chemical shielding of TMS was calculated at the pbe1pbe/3-21g* level of theory using the GIAO method. The chemical shielding of TMS was used as the reference (0 ppm) to obtain all other chemical shifts. A series of small organic molecules were optimized and the chemical shieldings were calculated in the same manner as that for TMS. To correct for biases arising from the applied level of theory, especially the bias from the small basis set size, a linear regression analysis of theoretical versus experimental chemical shifts was used. The slope and intercept from this regression was used to correct the calculated chemical shifts. The chemical shift was calculated by subtracting the chemical shielding value of the compound of interest from that of TMS and applying the slope and intercept corrections obtained from the regression analysis. Corrected_shift=((TMS_shielding - uncorrected shielding) -4.53)/0.85 15N chemical shifts: A cyclic pentamer of ammonia (NH3_5) was geometry optimized at the B3LYP/6-311+g* level of theory. The chemical shielding of NH3_5 was calculated at the pbe1pbe/3-21g* level of theory using the GIAO method. The chemical shielding of NH3_5 was used as the reference (0 ppm) to obtain all other chemical shifts. A series of small organic molecules were optimized and the chemical shieldings were calculated in the same manner as that for NH3_5. To correct for biases arising from the applied level of theory, especially the bias from the small basis set size, a linear regression analysis was used. The slope and intercept from this regression was used to correct the calculated chemical shifts. The chemical shift was calculated by subtracting the chemical shielding value of the compound of interest from that of NH3_5 and applying the slope and intercept corrections obtained from the regression analysis. Corrected_shift=((NH_3_5_shielding - uncorrected_shielding)+10.2)/0.9088 31P chemical shifts: Phosphoric acid (H3PO4) was geometry optimized at the B3LYP/6-311+g* level of theory. The chemical shielding of H3PO4 was calculated at the pbe1pbe/3-21g* level of theory using the GIAO method. The chemical shielding of H3PO4 was used as the reference (0 ppm) to obtain all other chemical shifts. No correction for linear bias or offset was applied to calculated 31P chemical shifts. The chemical shift was calculated by subtracting the chemical shielding value of the compound of interest from that of H3PO4. Shift=(H3PO4_shielding - shielding) ; loop_ _Chem_shifts_calc_software.Software_ID _Chem_shifts_calc_software.Software_label _Chem_shifts_calc_software.Entry_ID _Chem_shifts_calc_software.Chem_shifts_calc_type_ID 1 $software_1 bmst000033 1 stop_ save_ save_theoretical_chem_shifts _Theoretical_chem_shift_list.Sf_category theoretical_chem_shifts _Theoretical_chem_shift_list.Sf_framecode theoretical_chem_shifts _Theoretical_chem_shift_list.Entry_ID bmst000033 _Theoretical_chem_shift_list.ID 1 _Theoretical_chem_shift_list.Data_file_name ATP_3304.g03.shifts _Theoretical_chem_shift_list.Chem_shifts_calc_type_ID 1 _Theoretical_chem_shift_list.Chem_shifts_calc_type_label $chem_shifts_calc_type _Theoretical_chem_shift_list.Model_atomic_coordinates_ID 1 _Theoretical_chem_shift_list.Model_atomic_coordinates_label $conformer_family_coord_set_1 _Theoretical_chem_shift_list.Fermi_contact_spin_density_units ? _Theoretical_chem_shift_list.Chem_shift_1H_err ? _Theoretical_chem_shift_list.Chem_shift_2H_err ? _Theoretical_chem_shift_list.Chem_shift_13C_err ? _Theoretical_chem_shift_list.Chem_shift_15N_err ? _Theoretical_chem_shift_list.Chem_shift_19F_err ? _Theoretical_chem_shift_list.Chem_shift_31P_err ? _Theoretical_chem_shift_list.Details ? _Theoretical_chem_shift_list.Text_data_format ? _Theoretical_chem_shift_list.Text_data ? loop_ _Theoretical_chem_shift.ID _Theoretical_chem_shift.Entity_assembly_ID _Theoretical_chem_shift.Entity_ID _Theoretical_chem_shift.Comp_index_ID _Theoretical_chem_shift.Comp_ID _Theoretical_chem_shift.Atom_ID _Theoretical_chem_shift.Atom_type _Theoretical_chem_shift.Fermi_contact_spin_density _Theoretical_chem_shift.Val _Theoretical_chem_shift.Val_err _Theoretical_chem_shift.Auth_seq_ID _Theoretical_chem_shift.Auth_comp_ID _Theoretical_chem_shift.Auth_atom_ID _Theoretical_chem_shift.Entry_ID _Theoretical_chem_shift.Theoretical_chem_shift_list_ID 1 1 1 1 1 C1 C ? 159.053 ? ATP ? ? bmst000033 1 2 1 1 1 1 C2 C ? 145.589 ? ATP ? ? bmst000033 1 3 1 1 1 1 C3 C ? 73.486 ? ATP ? ? bmst000033 1 4 1 1 1 1 C4 C ? 126.028 ? ATP ? ? bmst000033 1 5 1 1 1 1 C5 C ? 160.544 ? ATP ? ? bmst000033 1 6 1 1 1 1 C6 C ? 154.886 ? ATP ? ? bmst000033 1 7 1 1 1 1 C7 C ? 93.270 ? ATP ? ? bmst000033 1 8 1 1 1 1 C8 C ? 80.283 ? ATP ? ? bmst000033 1 9 1 1 1 1 C9 C ? 84.474 ? ATP ? ? bmst000033 1 10 1 1 1 1 C10 C ? 100.254 ? ATP ? ? bmst000033 1 11 1 1 1 1 N11 N ? 86.399 ? ATP ? ? bmst000033 1 12 1 1 1 1 N12 N ? 256.886 ? ATP ? ? bmst000033 1 13 1 1 1 1 N13 N ? 232.320 ? ATP ? ? bmst000033 1 14 1 1 1 1 N14 N ? 263.251 ? ATP ? ? bmst000033 1 15 1 1 1 1 N15 N ? 178.298 ? ATP ? ? bmst000033 1 16 1 1 1 1 P29 P ? 0.726 ? ATP ? ? bmst000033 1 17 1 1 1 1 P30 P ? 1.330 ? ATP ? ? bmst000033 1 18 1 1 1 1 P31 P ? -7.249 ? ATP ? ? bmst000033 1 19 1 1 1 1 H32 H ? 9.883 ? ATP ? ? bmst000033 1 20 1 1 1 1 H33 H ? 9.186 ? ATP ? ? bmst000033 1 21 1 1 1 1 H34 H ? 5.262 ? ATP ? ? bmst000033 1 22 1 1 1 1 H35 H ? 5.061 ? ATP ? ? bmst000033 1 23 1 1 1 1 H36 H ? 5.346 ? ATP ? ? bmst000033 1 24 1 1 1 1 H37 H ? 4.948 ? ATP ? ? bmst000033 1 25 1 1 1 1 H38 H ? 5.191 ? ATP ? ? bmst000033 1 26 1 1 1 1 H39 H ? 7.158 ? ATP ? ? bmst000033 1 27 1 1 1 1 H40 H ? 5.516 ? ATP ? ? bmst000033 1 28 1 1 1 1 H41 H ? 6.273 ? ATP ? ? bmst000033 1 29 1 1 1 1 H42 H ? 0.559 ? ATP ? ? bmst000033 1 30 1 1 1 1 H43 H ? 7.175 ? ATP ? ? bmst000033 1 31 1 1 1 1 H44 H ? 4.668 ? ATP ? ? bmst000033 1 32 1 1 1 1 H45 H ? 7.090 ? ATP ? ? bmst000033 1 33 1 1 1 1 H46 H ? 4.637 ? ATP ? ? bmst000033 1 34 1 1 1 1 H47 H ? 7.456 ? ATP ? ? bmst000033 1 stop_ save_ save_conformer_family_coord_set_1 _Conformer_family_coord_set.Sf_category conformer_family_coord_set _Conformer_family_coord_set.Sf_framecode conformer_family_coord_set_1 _Conformer_family_coord_set.Entry_ID bmst000033 _Conformer_family_coord_set.ID 1 _Conformer_family_coord_set.File_name ATP_3304_opt.pdb _Conformer_family_coord_set.Details ? loop_ _Conformer_family_software.Software_ID _Conformer_family_software.Software_label _Conformer_family_software.Entry_ID _Conformer_family_software.Conformer_family_coord_set_ID 1 $software_1 bmst000033 1 stop_ loop_ _Atom_site.Model_ID _Atom_site.ID _Atom_site.Label_entity_assembly_ID _Atom_site.Label_entity_ID _Atom_site.Label_comp_index_ID _Atom_site.Label_comp_ID _Atom_site.Label_atom_ID _Atom_site.Auth_seq_ID _Atom_site.Auth_comp_ID _Atom_site.Auth_atom_ID _Atom_site.Type_symbol _Atom_site.Cartn_x _Atom_site.Cartn_y _Atom_site.Cartn_z _Atom_site.Entry_ID _Atom_site.Conformer_family_coord_set_ID 1 1 1 1 1 1 C1 1 1 C1 C -3.521 -4.423 -2.360 bmst000033 1 1 2 1 1 1 1 C2 1 1 C2 C -1.152 -3.096 1.054 bmst000033 1 1 3 1 1 1 1 C3 1 1 C3 C 1.874 -0.297 -0.745 bmst000033 1 1 4 1 1 1 1 C4 1 1 C4 C -2.978 -3.681 0.147 bmst000033 1 1 5 1 1 1 1 C5 1 1 C5 C -4.296 -4.019 -0.225 bmst000033 1 1 6 1 1 1 1 C6 1 1 C6 C -2.014 -3.762 -0.862 bmst000033 1 1 7 1 1 1 1 C7 1 1 C7 C 2.211 -1.775 -0.886 bmst000033 1 1 8 1 1 1 1 C8 1 1 C8 C 2.031 -2.314 -2.322 bmst000033 1 1 9 1 1 1 1 C9 1 1 C9 C 0.576 -2.807 -2.287 bmst000033 1 1 10 1 1 1 1 C10 1 1 C10 C 0.509 -3.388 -0.855 bmst000033 1 1 11 1 1 1 1 N11 1 1 N11 N -5.321 -4.005 0.659 bmst000033 1 1 12 1 1 1 1 N12 1 1 N12 N -4.543 -4.388 -1.497 bmst000033 1 1 13 1 1 1 1 N13 1 1 N13 N -2.234 -4.131 -2.137 bmst000033 1 1 14 1 1 1 1 N14 1 1 N14 N -2.422 -3.259 1.340 bmst000033 1 1 15 1 1 1 1 N15 1 1 N15 N -0.833 -3.373 -0.266 bmst000033 1 1 16 1 1 1 1 O16 1 1 O16 O 2.865 -3.433 -2.563 bmst000033 1 1 17 1 1 1 1 O17 1 1 O17 O 0.289 -3.700 -3.313 bmst000033 1 1 18 1 1 1 1 O18 1 1 O18 O -1.014 6.466 0.924 bmst000033 1 1 19 1 1 1 1 O19 1 1 O19 O 0.087 5.287 -0.991 bmst000033 1 1 20 1 1 1 1 O20 1 1 O20 O 0.807 -0.228 2.801 bmst000033 1 1 21 1 1 1 1 O21 1 1 O21 O 2.754 4.089 1.974 bmst000033 1 1 22 1 1 1 1 O22 1 1 O22 O 1.583 6.449 0.873 bmst000033 1 1 23 1 1 1 1 O23 1 1 O23 O -0.552 0.756 0.768 bmst000033 1 1 24 1 1 1 1 O24 1 1 O24 O 1.836 3.136 -0.320 bmst000033 1 1 25 1 1 1 1 O25 1 1 O25 O 1.333 -2.559 -0.054 bmst000033 1 1 26 1 1 1 1 O26 1 1 O26 O 1.997 0.078 0.651 bmst000033 1 1 27 1 1 1 1 O27 1 1 O27 O 0.282 4.299 1.354 bmst000033 1 1 28 1 1 1 1 O28 1 1 O28 O 1.326 2.082 2.035 bmst000033 1 1 29 1 1 1 1 P29 1 1 P29 P 0.337 5.730 0.524 bmst000033 1 1 30 1 1 1 1 P30 1 1 P30 P 0.747 0.636 1.453 bmst000033 1 1 31 1 1 1 1 P31 1 1 P31 P 1.616 3.370 1.132 bmst000033 1 1 32 1 1 1 1 H32 1 1 H32 H -3.770 -4.727 -3.374 bmst000033 1 1 33 1 1 1 1 H33 1 1 H33 H -0.388 -2.764 1.741 bmst000033 1 1 34 1 1 1 1 H34 1 1 H34 H 2.584 0.326 -1.295 bmst000033 1 1 35 1 1 1 1 H35 1 1 H35 H 0.861 -0.078 -1.090 bmst000033 1 1 36 1 1 1 1 H36 1 1 H36 H 3.234 -1.946 -0.531 bmst000033 1 1 37 1 1 1 1 H37 1 1 H37 H 2.172 -1.536 -3.085 bmst000033 1 1 38 1 1 1 1 H38 1 1 H38 H -0.080 -1.919 -2.309 bmst000033 1 1 39 1 1 1 1 H39 1 1 H39 H 0.887 -4.418 -0.857 bmst000033 1 1 40 1 1 1 1 H40 1 1 H40 H -6.259 -4.127 0.306 bmst000033 1 1 41 1 1 1 1 H41 1 1 H41 H -5.184 -3.596 1.570 bmst000033 1 1 42 1 1 1 1 H42 1 1 H42 H 3.779 -3.120 -2.632 bmst000033 1 1 43 1 1 1 1 H43 1 1 H43 H -0.654 -3.960 -3.187 bmst000033 1 1 44 1 1 1 1 H44 1 1 H44 H -1.796 6.087 0.488 bmst000033 1 1 45 1 1 1 1 H45 1 1 H45 H 0.676 4.525 -1.210 bmst000033 1 1 46 1 1 1 1 H46 1 1 H46 H -0.009 -0.123 3.321 bmst000033 1 1 47 1 1 1 1 H47 1 1 H47 H 2.742 5.055 1.765 bmst000033 1 stop_ save_