#!/bin/csh

xyz2pipe  -in data/test%03d.fid -x -verb                         \
#   | nmrPipe  -fn SOL                                            \
#   | nmrPipe  -fn POLY -time                                     \
   | nmrPipe  -fn SP -off 0.5 -end 1.00 -pow 2 -c 1.0  \
   | nmrPipe  -fn ZF -auto                                       \
   | nmrPipe  -fn FT                                             \
   | nmrPipe  -fn PS -p0  -71.0 -p1 0.0   -di                      \
   | nmrPipe  -fn EXT -x1  -1.0ppm -xn 6.0ppm  -sw   \
   | nmrPipe  -fn POLY -auto -ord 0                               \
   | pipe2xyz -out data/test%03d.ft3 -x -ov

xyz2pipe -in data/test%03d.ft3 -y -verb                        \
#   | nmrPipe  -fn LP  -pred 64 -ord 10                 \
   | nmrPipe  -fn SP -off 0.50 -end 1.00 -pow 1 -c 0.5            \
   | nmrPipe  -fn ZF -auto                                       \
   | nmrPipe  -fn FT                                             \
   | nmrPipe  -fn PS -p0 90.0 -p1  0.0 -di                       \
   | nmrPipe  -fn POLY -auto -ord 0                               \
   | pipe2xyz -out data/test%03d.ft3 -y -inPlace

xyz2pipe -in data/test%03d.ft3 -z -verb                        \
   | nmrPipe  -fn LP  -pred 48 -ord 10                 \
   | nmrPipe  -fn SP -off 0.5 -end 1.00 -pow 2 -c 0.5            \
   | nmrPipe  -fn ZF -auto                                       \
   | nmrPipe  -fn FT -alt                                    \
   | nmrPipe  -fn PS -p0 0.0 -p1 0.0 -di                       \
   | nmrPipe  -fn POLY -auto -ord 0                               \
   | pipe2xyz -out data/test%03d.ft3 -z -inPlace 

#xyz2pipe  -in data/test%03d.ft3 -z -verb                  \
#   | nmrPipe -fn HT -auto                               \
#   | nmrPipe -fn PS -inv -hdr                         \
#   | nmrPipe -fn FT -inv                          \
##   | nmrPipe -fn SHUF -exlr   \
#   | nmrPipe -fn ZF -inv            \
#   | nmrPipe -fn SP -inv -hdr               \
##   | nmrPipe  -fn LP -pred 64 -ord 32                           \
#   | nmrPipe  -fn SP -hdr                                        \
#   | nmrPipe  -fn ZF -auto                                       \
#   | nmrPipe  -fn FT -verb                                       \
##   | nmrPipe  -fn SHUF -exlr   \
#   | nmrPipe  -fn PS -hdr -di                       \
#   | nmrPipe  -fn POLY -auto -ord 0                               \
#   | pipe2xyz -out data/test%03d.ft3 -z -inPlace 

xyz2pipe -in data/test%03d.ft3 -y -verb \
 > d2o_c13_noesy_aliph.ft3

# to match with varian data
# pipe2ucsf -213 name.ft3 name.ucsf