#cp /farm/ftp/pub/incoming/buffalo/noe605.prot ../../xeasy/simnoe/. #cp /farm/ftp/pub/incoming/buffalo/noe609.peaks ../../xeasy/simnoe/. cp ../../xeasy/simnoe/sim75_0122.peaks simnoe.peaks #cp ../../xeasy/simnoe/Nnoe1101.peaks Nnoe.peaks cp ../../xeasy/simnoe/aronoe0122.peaks aro.peaks #awk -f spark.awk ../../../analysis/sparky/simnoesy_xeasy.peaks > simnoe.peaks awk -f ../warn.awk simnoe.peaks > overint.peaks #cp noe326.peaks simnoe.peaks cp ../../xeasy/simnoe/sim75_0122.prot noefold.prot #cp ../../../analysis/noesy/noe.seq . #cp ../../cyana/calc2/talos.aco . #cp ../../xeasy/simnoe/noea326.peaks aro.peaks awk -f ../protc2n.awk noefold.prot > noeall.prot cp noeall.prot noe.prot cp simnoe.peaks simnoemod.peaks cp aro.peaks aromod.peaks #cp sim2 simnoemod.peaks awk -f ../peak2c.awk simnoemod.peaks > simc.peaks awk -f ../peak2a.awk aro.peaks > aronoe.peaks cat simc.peaks aronoe.peaks > cnoe.peaks #cp simc.peaks cnoe.peaks # mv simc.peaks cnoe.peaks awk -f ../peak2n.awk simnoemod.peaks > nnoe.peaks #cp ../../xeasy/simnoe/noe.seq . #sed -f ../seq.sed noe.seq > tr80.seq sed -f ../c.sed ./cnoe.peaks > cnoe4abs.peaks sed -f ../c.sed ./nnoe.peaks > nnoe4abs.peaks #sed -f ../c.sed ./Nnoe.peaks > Nnoe4abs.peaks #sed -f ../c.sed ./ali.peaks > ali4abs.peaks awk -f ../unassignc.awk cnoe4abs.peaks > unc.peaks awk -f ../unassignn.awk nnoe4abs.peaks > unn.peaks awk -f ../noiseN.awk nnoe4abs.peaks > nnoeabs.peaks #awk -f ../noiseN.awk Nnoe4abs.peaks > Nnoeabs.peaks #awk -f ../noiseC.awk ali4abs.peaks > aliabs.peaks awk -f ../keepN.awk nnoeabs.peaks > nnoe1.peaks awk -f ../keepNiso.awk nnoeabs.peaks > nnoe2.peaks awk -f ../noiseC.awk cnoe4abs.peaks > cnoeabs.peaks awk -f ../keepC.awk cnoeabs.peaks > cnoe1.peaks awk -f ../keepCiso.awk cnoeabs.peaks > cnoe2.peaks #awk -f ../shortc.awk cnoe1.peaks > cnoes.peaks #awk -f ../shortn.awk nnoe1.peaks > nnoes.peaks #awk -f noiseA.awk anoe2.peaks > anoe1.peaks #awk -f a.awk anoe4abs.peaks > newa.peaks #awk -f ../c.awk cnoe4abs.peaks > newc.peaks #awk -f ../n.awk nnoe4abs.peaks > newn.peaks #dyana ./short