#!/bin/csh # tochsqc.csh # version 042600 # Brian Volkman (volkman@nmrfam.wisc.edu) # # Process 3D 15N TOCSY-HSQC aquired with pulse program # tochsqc.bv or n15tocfhsqc.fa. Produces final data size # of 512(1HN)x256(1H)x128(15N). # # Extension of time domain data with forward-backward # linear prediction in 15N dimension # # Get phase parameters for direct 1H dimension in nmrDraw, # set on first PS line xyz2pipe -in ./fid/test%03d.fid -x \ | nmrPipe -fn POLY -time \ | nmrPipe -fn SP -off 0.5 -end 1 -c 1 \ | nmrPipe -fn ZF -size 1024 \ | nmrPipe -fn FT -verb \ | nmrPipe -fn PS -p0 145 -p1 0 -di \ | nmrPipe -fn EXT -left -sw \ | nmrPipe -fn POLY -ord 1 \ | nmrPipe -fn ZTP \ | nmrPipe -fn SP -off 0.5 -pow 2 -end 1.0 -c 1.0 \ | nmrPipe -fn ZF -size 256 \ | nmrPipe -fn FT -verb \ | nmrPipe -fn PS -p0 -135 -p1 180 -di \ | nmrPipe -fn YTP \ | nmrPipe -fn LP -fb \ | nmrPipe -fn SP -off 0.5 -pow 2 -end 1.0 -c 1.0 \ | nmrPipe -fn ZF -size 128 \ | nmrPipe -fn FT -verb \ | nmrPipe -fn PS -p0 -90 -p1 180 -di \ | nmrPipe -fn ZTP \ | nmrPipe -out test.ft2 -ov -verb #pipe2ucsf test.ft2 ku70_to15n.ucsf pipe2xeasy -f 0.001 -out to15n < test.ft2