BMRB Entry 15264
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15264
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Complete backbone 15N, 13C, and 1H resonance assignments for the N-terminal domain of AhpF PubMed: 17919953
Deposition date: 2007-05-23 Original release date: 2007-10-29
Authors: Benison, Gregory; Barbar, Elisar; Horita, David
Citation: Benison, Gregory; Berkholz, Donald; Barbar, Elisar. "Protein assignments without peak lists using higher-order spectra" J. Magn. Reson. 189, 173-181 (2007).
Assembly members:
ahpfn, polymer, 202 residues, Formula weight is not available
Natural source: Common Name: Salmonella typhimurium Taxonomy ID: 602 Superkingdom: Bacteria Kingdom: not available Genus/species: Salmonella typhimurium
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
ahpfn: MLDTNMKTQLRAYLEKLTKP
VELIATLDDSAKSAEIKELL
AEIAELSDKVTFKEDNTLPV
RKPSFLITNPGSQQGPRFAG
SPLGHEFTSLVLALLWTGGH
PSKEAQSLLEQIRDIDGDFE
FETYYSLSCHNCPDVVQALN
LMAVLNPRIKHTAIDGGTFQ
NEITERNVMGVPAVFVNGKE
FGQGRMTLTEIVAKVDTGAE
KR
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 390 |
15N chemical shifts | 191 |
1H chemical shifts | 191 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | ahpfn | 1 |
Entities:
Entity 1, ahpfn 202 residues - Formula weight is not available
1 | MET | LEU | ASP | THR | ASN | MET | LYS | THR | GLN | LEU | ||||
2 | ARG | ALA | TYR | LEU | GLU | LYS | LEU | THR | LYS | PRO | ||||
3 | VAL | GLU | LEU | ILE | ALA | THR | LEU | ASP | ASP | SER | ||||
4 | ALA | LYS | SER | ALA | GLU | ILE | LYS | GLU | LEU | LEU | ||||
5 | ALA | GLU | ILE | ALA | GLU | LEU | SER | ASP | LYS | VAL | ||||
6 | THR | PHE | LYS | GLU | ASP | ASN | THR | LEU | PRO | VAL | ||||
7 | ARG | LYS | PRO | SER | PHE | LEU | ILE | THR | ASN | PRO | ||||
8 | GLY | SER | GLN | GLN | GLY | PRO | ARG | PHE | ALA | GLY | ||||
9 | SER | PRO | LEU | GLY | HIS | GLU | PHE | THR | SER | LEU | ||||
10 | VAL | LEU | ALA | LEU | LEU | TRP | THR | GLY | GLY | HIS | ||||
11 | PRO | SER | LYS | GLU | ALA | GLN | SER | LEU | LEU | GLU | ||||
12 | GLN | ILE | ARG | ASP | ILE | ASP | GLY | ASP | PHE | GLU | ||||
13 | PHE | GLU | THR | TYR | TYR | SER | LEU | SER | CYS | HIS | ||||
14 | ASN | CYS | PRO | ASP | VAL | VAL | GLN | ALA | LEU | ASN | ||||
15 | LEU | MET | ALA | VAL | LEU | ASN | PRO | ARG | ILE | LYS | ||||
16 | HIS | THR | ALA | ILE | ASP | GLY | GLY | THR | PHE | GLN | ||||
17 | ASN | GLU | ILE | THR | GLU | ARG | ASN | VAL | MET | GLY | ||||
18 | VAL | PRO | ALA | VAL | PHE | VAL | ASN | GLY | LYS | GLU | ||||
19 | PHE | GLY | GLN | GLY | ARG | MET | THR | LEU | THR | GLU | ||||
20 | ILE | VAL | ALA | LYS | VAL | ASP | THR | GLY | ALA | GLU | ||||
21 | LYS | ARG |
Samples:
sample_1: ahpfn, [U-100% 13C; U-100% 15N], 1 mM; H2O 90%; D2O 10%; potassium phosphate 50 mM; potassium chloride 50 mM; DSS 1 mM
sample_conditions_1: ionic strength: 0.25 M; pH: 6.5; pressure: 1 atm; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
AutoAssign, Zimmerman, Moseley, Kulikowski and Montelione - chemical shift assignment
Burrow-Owl v1.2, Greg Benison; Barbar Lab - chemical shift assignment
NMR spectrometers:
- Bruker DRX 600 MHz
Related Database Links:
BMRB | 16265 |
PDB | |
DBJ | BAA02486 BAH62352 BAJ35614 BAP06377 GAL49470 |
EMBL | CAD05085 CAR32166 CAR36509 CAR60178 CBG23683 |
GB | AAA16432 AAL19560 AAO69861 AAV78017 AAX64546 |
PIR | AC0577 |
REF | NP_455185 NP_459601 WP_000886405 WP_000887631 WP_000887632 |
SP | P19480 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts