BMRB Entry 16218
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16218
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Title: Backbone 1H, 13CA, and 15N Chemical Shifts Assignments and 15N T1 and T2 Relaxation Parameters for the N-terminal (1-119) Fragment of sperm whale apomyoglobin in the presence of DnaK-beta
Deposition date: 2009-03-17 Original release date: 2012-08-06
Authors: Rajagopalan, Senapathy; Cavagnero, Silvia; Kurt, Nese; Kwon, Jay
Citation: Rajagopalan, Senapathy; Cavagnero, Silvia; Kurt, Nese; Kwon, Jay. "Backbone Dynamics of a Large Chaperone-Free and Chaperone-Bound Hsp70 Substrate" Arch. Biochem. Biophys. ., .-..
Assembly members:
apoMb_1-119_fragment, polymer, 119 residues, Formula weight is not available
Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: Escherichia coli
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
apoMb_1-119_fragment: VLSEGEWQLVLHVWAKVEAD
VAGHGQDILIRLFKSHPETL
EKFDRFKHLKTEAEMKASED
LKKHGVTVLTALGAILKKKG
HHEAELKPLAQSHATKHKIP
IKYLEFISEAIIHVLHSRH
- assigned_chemical_shifts
- heteronucl_NOEs
- heteronucl_T1_relaxation
- heteronucl_T2_relaxation
Data type | Count |
13C chemical shifts | 38 |
15N chemical shifts | 35 |
1H chemical shifts | 35 |
heteronuclear NOE values | 23 |
T1 relaxation values | 23 |
T2 relaxation values | 23 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | apoMb_1-119_fragment | 1 |
Entities:
Entity 1, apoMb_1-119_fragment 119 residues - Formula weight is not available
1 | VAL | LEU | SER | GLU | GLY | GLU | TRP | GLN | LEU | VAL | ||||
2 | LEU | HIS | VAL | TRP | ALA | LYS | VAL | GLU | ALA | ASP | ||||
3 | VAL | ALA | GLY | HIS | GLY | GLN | ASP | ILE | LEU | ILE | ||||
4 | ARG | LEU | PHE | LYS | SER | HIS | PRO | GLU | THR | LEU | ||||
5 | GLU | LYS | PHE | ASP | ARG | PHE | LYS | HIS | LEU | LYS | ||||
6 | THR | GLU | ALA | GLU | MET | LYS | ALA | SER | GLU | ASP | ||||
7 | LEU | LYS | LYS | HIS | GLY | VAL | THR | VAL | LEU | THR | ||||
8 | ALA | LEU | GLY | ALA | ILE | LEU | LYS | LYS | LYS | GLY | ||||
9 | HIS | HIS | GLU | ALA | GLU | LEU | LYS | PRO | LEU | ALA | ||||
10 | GLN | SER | HIS | ALA | THR | LYS | HIS | LYS | ILE | PRO | ||||
11 | ILE | LYS | TYR | LEU | GLU | PHE | ILE | SER | GLU | ALA | ||||
12 | ILE | ILE | HIS | VAL | LEU | HIS | SER | ARG | HIS |
Samples:
sample_1: apomyoglobin mM; Sodium Acetate 20 mM; potassium chloride 5 mM; D2O 5%
sample_conditions_1: ionic strength: 5 mM; pH: 6.0; pressure: 1 atm; temperature: 277 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCA | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRPIPE_and_NMRVIEW, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax, Johnson, One Moon Scientific - chemical shift assignment
NMR spectrometers:
- Varian INOVA 600 MHz
Related Database Links:
BMRB | 1027 1029 1200 1413 1455 1457 1459 1461 1463 1465 1467 1469 1471 15589 16217 16499 16500 16501 1752 2345 2346 2347 2348 2431 2432 2433 2434 291 292 293 40 4061 4062 426 4568 4676 4695 |
PDB | |
DBJ | BAF03579 BAF03582 |
GB | AAA72199 |
PRF | 742482A |
REF | NP_001277651 |
SP | P02184 P02185 Q0KIY5 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts