BMRB Entry 10286

Click here to enlarge.

PDB ID: 2da4
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR10286
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title: Solution structure of the homeobox domain of the hypothetical protein, DKFZp686K21156

Deposition date: 2008-12-17 Original release date: 2009-12-17

Authors: Ohnishi, S.; Kigawa, T.; Saito, K.; Koshiba, S.; Inoue, M.; Yokoyama, S.

Citation: Ohnishi, S.; Kigawa, T.; Saito, K.; Koshiba, S.; Inoue, M.; Yokoyama, S.. "Solution structure of the homeobox domain of the hypothetical protein, DKFZp686K21156" . ., .-..

Assembly members:
homeobox domain, polymer, 80 residues, Formula weight is not available

Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: cell free synthesis

Entity Sequences (FASTA):
homeobox domain: GSSGSSGALQDRTQFSDRDL ATLKKYWDNGMTSLGSVCRE KIEAVATELNVDCEIVRTWI GNRRRKYRLMGIEVSGPSSG

Data sets:

assigned_chemical_shifts
- chemical_shift_1

Data type	Count
13C chemical shifts	319
15N chemical shifts	75
1H chemical shifts	499

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

1	GLY	SER	SER	GLY	SER	SER	GLY	ALA	LEU	GLN
2	ASP	ARG	THR	GLN	PHE	SER	ASP	ARG	ASP	LEU
3	ALA	THR	LEU	LYS	LYS	TYR	TRP	ASP	ASN	GLY
4	MET	THR	SER	LEU	GLY	SER	VAL	CYS	ARG	GLU
5	LYS	ILE	GLU	ALA	VAL	ALA	THR	GLU	LEU	ASN
6	VAL	ASP	CYS	GLU	ILE	VAL	ARG	THR	TRP	ILE
7	GLY	ASN	ARG	ARG	ARG	LYS	TYR	ARG	LEU	MET
8	GLY	ILE	GLU	VAL	SER	GLY	PRO	SER	SER	GLY

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	isotropic	condition_1
3D 15N-separated NOESY	sample_1	isotropic	condition_1

PDB	2DA4
REF	XP_012429181

Biological Magnetic Resonance Data Bank

BMRB Entry 10286

Title: Solution structure of the homeobox domain of the hypothetical protein, DKFZp686K21156

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	SER	GLY	SER	SER	GLY	ALA	LEU	GLN
2	ASP	ARG	THR	GLN	PHE	SER	ASP	ARG	ASP	LEU
3	ALA	THR	LEU	LYS	LYS	TYR	TRP	ASP	ASN	GLY
4	MET	THR	SER	LEU	GLY	SER	VAL	CYS	ARG	GLU
5	LYS	ILE	GLU	ALA	VAL	ALA	THR	GLU	LEU	ASN
6	VAL	ASP	CYS	GLU	ILE	VAL	ARG	THR	TRP	ILE
7	GLY	ASN	ARG	ARG	ARG	LYS	TYR	ARG	LEU	MET
8	GLY	ILE	GLU	VAL	SER	GLY	PRO	SER	SER	GLY

1	GLY	SER	SER	GLY	SER	SER	GLY	ALA	LEU	GLN
2	ASP	ARG	THR	GLN	PHE	SER	ASP	ARG	ASP	LEU
3	ALA	THR	LEU	LYS	LYS	TYR	TRP	ASP	ASN	GLY
4	MET	THR	SER	LEU	GLY	SER	VAL	CYS	ARG	GLU
5	LYS	ILE	GLU	ALA	VAL	ALA	THR	GLU	LEU	ASN
6	VAL	ASP	CYS	GLU	ILE	VAL	ARG	THR	TRP	ILE
7	GLY	ASN	ARG	ARG	ARG	LYS	TYR	ARG	LEU	MET
8	GLY	ILE	GLU	VAL	SER	GLY	PRO	SER	SER	GLY

1	GLY	SER	SER	GLY	SER	SER	GLY	ALA	LEU	GLN
2	ASP	ARG	THR	GLN	PHE	SER	ASP	ARG	ASP	LEU
3	ALA	THR	LEU	LYS	LYS	TYR	TRP	ASP	ASN	GLY
4	MET	THR	SER	LEU	GLY	SER	VAL	CYS	ARG	GLU
5	LYS	ILE	GLU	ALA	VAL	ALA	THR	GLU	LEU	ASN
6	VAL	ASP	CYS	GLU	ILE	VAL	ARG	THR	TRP	ILE
7	GLY	ASN	ARG	ARG	ARG	LYS	TYR	ARG	LEU	MET
8	GLY	ILE	GLU	VAL	SER	GLY	PRO	SER	SER	GLY