BMRB Entry 11424

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PDB ID: 2rrm
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11424
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Interplay between phosphatidyl-inositol-phosphates and claudins upon binding to the 1st PDZ domain of zonula ocludens 1 PubMed: 21431884

Deposition date: 2011-01-05 Original release date: 2011-07-01

Authors: Hiroaki, Hidekazu; Satomura, kaori; Goda, Natsuko; Umetsu, Yoshitaka; Taniguchi, Ryo; Ikegami, Takahisa; Furuse, Mikio

Citation: Umetsu, Yoshitaka; Goda, Natsuko; Taniguchi, Ryo; Satomura, Kaori; Ikegami, Takahisa; Furuse, Mikio; Hiroaki, Hidekazu. "(1)H, (13)C, and (15)N resonance assignment of the first PDZ domain of mouse ZO-1." Biomol. NMR Assignments ., .-. (2011).

Assembly members:
the first PDZ domain of mouse ZO-1, polymer, 100 residues, 10817.255 Da.

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
the first PDZ domain of mouse ZO-1: GPLGSDHIWEQHTVTLHRAP GFGFGIAISGGRDNPHFQSG ETSIVISDVLKGGPAEGQLQ ENDRVAMVNGVSMDNVEHAF AVQQLRKSGKNAKITIRRKK

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	368
15N chemical shifts	86
1H chemical shifts	594

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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1	GLY	PRO	LEU	GLY	SER	ASP	HIS	ILE	TRP	GLU
2	GLN	HIS	THR	VAL	THR	LEU	HIS	ARG	ALA	PRO
3	GLY	PHE	GLY	PHE	GLY	ILE	ALA	ILE	SER	GLY
4	GLY	ARG	ASP	ASN	PRO	HIS	PHE	GLN	SER	GLY
5	GLU	THR	SER	ILE	VAL	ILE	SER	ASP	VAL	LEU
6	LYS	GLY	GLY	PRO	ALA	GLU	GLY	GLN	LEU	GLN
7	GLU	ASN	ASP	ARG	VAL	ALA	MET	VAL	ASN	GLY
8	VAL	SER	MET	ASP	ASN	VAL	GLU	HIS	ALA	PHE
9	ALA	VAL	GLN	GLN	LEU	ARG	LYS	SER	GLY	LYS
10	ASN	ALA	LYS	ILE	THR	ILE	ARG	ARG	LYS	LYS

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D HN(CO)CA	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_1	isotropic	sample_conditions_1

PDB	2H2B 2H2C 2H3M 2RRM 4OEO 4OEP 4YYX
DBJ	BAA03274 BAF95000 BAG10532 BAG65513
EMBL	CAE45936
GB	AAA02891 AAD11529 AAH88825 AAI11713 AAI38029
REF	NP_001003140 NP_001099736 NP_001157046 NP_001287954 NP_001287955
SP	O97758 P39447 Q07157

Biological Magnetic Resonance Data Bank

BMRB Entry 11424

Title: Interplay between phosphatidyl-inositol-phosphates and claudins upon binding to the 1st PDZ domain of zonula ocludens 1 PubMed: 21431884

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	PRO	LEU	GLY	SER	ASP	HIS	ILE	TRP	GLU
2	GLN	HIS	THR	VAL	THR	LEU	HIS	ARG	ALA	PRO
3	GLY	PHE	GLY	PHE	GLY	ILE	ALA	ILE	SER	GLY
4	GLY	ARG	ASP	ASN	PRO	HIS	PHE	GLN	SER	GLY
5	GLU	THR	SER	ILE	VAL	ILE	SER	ASP	VAL	LEU
6	LYS	GLY	GLY	PRO	ALA	GLU	GLY	GLN	LEU	GLN
7	GLU	ASN	ASP	ARG	VAL	ALA	MET	VAL	ASN	GLY
8	VAL	SER	MET	ASP	ASN	VAL	GLU	HIS	ALA	PHE
9	ALA	VAL	GLN	GLN	LEU	ARG	LYS	SER	GLY	LYS
10	ASN	ALA	LYS	ILE	THR	ILE	ARG	ARG	LYS	LYS

1	GLY	PRO	LEU	GLY	SER	ASP	HIS	ILE	TRP	GLU
2	GLN	HIS	THR	VAL	THR	LEU	HIS	ARG	ALA	PRO
3	GLY	PHE	GLY	PHE	GLY	ILE	ALA	ILE	SER	GLY
4	GLY	ARG	ASP	ASN	PRO	HIS	PHE	GLN	SER	GLY
5	GLU	THR	SER	ILE	VAL	ILE	SER	ASP	VAL	LEU
6	LYS	GLY	GLY	PRO	ALA	GLU	GLY	GLN	LEU	GLN
7	GLU	ASN	ASP	ARG	VAL	ALA	MET	VAL	ASN	GLY
8	VAL	SER	MET	ASP	ASN	VAL	GLU	HIS	ALA	PHE
9	ALA	VAL	GLN	GLN	LEU	ARG	LYS	SER	GLY	LYS
10	ASN	ALA	LYS	ILE	THR	ILE	ARG	ARG	LYS	LYS

1	GLY	PRO	LEU	GLY	SER	ASP	HIS	ILE	TRP	GLU
2	GLN	HIS	THR	VAL	THR	LEU	HIS	ARG	ALA	PRO
3	GLY	PHE	GLY	PHE	GLY	ILE	ALA	ILE	SER	GLY
4	GLY	ARG	ASP	ASN	PRO	HIS	PHE	GLN	SER	GLY
5	GLU	THR	SER	ILE	VAL	ILE	SER	ASP	VAL	LEU
6	LYS	GLY	GLY	PRO	ALA	GLU	GLY	GLN	LEU	GLN
7	GLU	ASN	ASP	ARG	VAL	ALA	MET	VAL	ASN	GLY
8	VAL	SER	MET	ASP	ASN	VAL	GLU	HIS	ALA	PHE
9	ALA	VAL	GLN	GLN	LEU	ARG	LYS	SER	GLY	LYS
10	ASN	ALA	LYS	ILE	THR	ILE	ARG	ARG	LYS	LYS