BMRB Entry 15012
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15012
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Title: chemical shift assignment of the protein Atu4866 from Agrobacterium tumefaciens PubMed: 18042676
Deposition date: 2006-11-01 Original release date: 2008-05-12
Authors: Ai, Xuanjun; Semesi, Anthony; Yee, Adelinda; Arrowsmith, Cheryl; Li, Shawn; Choy, Wing-Yiu
Citation: Ai, Xuanjun; Semesi, Anthony; Yee, Adelinda; Arrowsmith, Cheryl; Choy, Wing-Yiu; Li, Shawn. "The hypothetical protein Atu4866 from Agrobacterium tumefaciens adopts a streptavidin-like fold" Protein Sci. 17, 154-158 (2008).
Assembly members:
Atu4866, polymer, 100 residues, Formula weight is not available
Natural source: Common Name: Agrobacterium tumefaciens Taxonomy ID: 358 Superkingdom: Bacteria Kingdom: not available Genus/species: Agrobacterium tumefaciens
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Atu4866: MGSSHHHHHHSSGRENLYFQ
GMQHPYVGIWVTADGRIRQE
LLPNGRYDEARGNRKSAYQG
RYEVRGAHINYWDDTGFTAD
GDFVSANELHHGGMTFYREK
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 282 |
15N chemical shifts | 73 |
1H chemical shifts | 458 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | Atu4866 | 1 |
Entities:
Entity 1, Atu4866 100 residues - Formula weight is not available
1 | MET | GLY | SER | SER | HIS | HIS | HIS | HIS | HIS | HIS | |
2 | SER | SER | GLY | ARG | GLU | ASN | LEU | TYR | PHE | GLN | |
3 | GLY | MET | GLN | HIS | PRO | TYR | VAL | GLY | ILE | TRP | |
4 | VAL | THR | ALA | ASP | GLY | ARG | ILE | ARG | GLN | GLU | |
5 | LEU | LEU | PRO | ASN | GLY | ARG | TYR | ASP | GLU | ALA | |
6 | ARG | GLY | ASN | ARG | LYS | SER | ALA | TYR | GLN | GLY | |
7 | ARG | TYR | GLU | VAL | ARG | GLY | ALA | HIS | ILE | ASN | |
8 | TYR | TRP | ASP | ASP | THR | GLY | PHE | THR | ALA | ASP | |
9 | GLY | ASP | PHE | VAL | SER | ALA | ASN | GLU | LEU | HIS | |
10 | HIS | GLY | GLY | MET | THR | PHE | TYR | ARG | GLU | LYS |
Samples:
sample_1: Atu4866, [U-13C; U-15N], 0.3 0.5 mM; sodium acetate mM; NaCl mM; Zn2+ mM; DTT uM; NaN3 mM; inhibitor mixture%; benzamidine mM
sample_conditions_1: ionic strength: 0.45 M; pH: 5.0; pressure: 1 atm; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
2D 1H-13C HSQC | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D C(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D H(CCO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HCCH-TOCSY | sample_1 | isotropic | sample_conditions_1 |
3D HNHA | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
3D 1H-13C NOESY | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRView v5.2.2, B.A. Johnson, R.A. Blevins - chemical shift assignment
NMR spectrometers:
- Varian INOVA 600 MHz
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts