BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 15083

Title: NMR Structure of the Sigma-54 RpoN Domain Bound to the-24 Promoter Element   PubMed: 17481658

Deposition date: 2006-12-19 Original release date: 2007-10-17

Authors: Doucleff, M.; Pelton, J.; Lee, P.; Wemmer, D.

Citation: Doucleff, M.; Pelton, J.; Lee, P.; Nixon, B.; Wemmer, D.. "Structural basis of DNA recognition by the alternative sigma-factor, sigma54"  J. Mol. Biol. 369, 1070-1078 (2007).

Assembly members:
NIRB_SIGMA-54_BINDING_SITE_NON-TEMPLATE_STRAND, polymer, 14 residues, 4364.794 Da.
NIRB_SIGMA-54_BINDING_SITE_TEMPLATE_STRAND, polymer, 14 residues, 4514.872 Da.
RNA_POLYMERASE_SIGMA_FACTOR_RPON, polymer, 63 residues, 7490.880 Da.

Natural source:   Common Name: Aquifex aeolicus   Taxonomy ID: 63363   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Aquifex aeolicus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
NIRB_SIGMA-54_BINDING_SITE_NON-TEMPLATE_STRAND: TTTTGGCACGTTTC
NIRB_SIGMA-54_BINDING_SITE_TEMPLATE_STRAND: GAAACGTGCCAAAA
RNA_POLYMERASE_SIGMA_FACTOR_RPON: HMLTQGELMKLIKEIVENED KRKPYSDQEIANILKEKGFK VARRTVAKYREMLGIPSSRE RRI

Data sets:
Data typeCount
13C chemical shifts208
15N chemical shifts61
1H chemical shifts663

Additional metadata:

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Related Database Links:

PDB 2AHQ 2O8K 2O9L
GB AAC06814
REF NP_213418 WP_010880356

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