BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 15121

Title: Backbone 1H, 13C and 15N resonance assignments for the 26kD human deubiquitinating enzyme UCH-L3   PubMed: 19636824

Deposition date: 2007-01-31 Original release date: 2007-06-27

Authors: Harris, Richard; Hommel, Ulrich; Driscoll, Paul

Citation: Harris, Richard; Eidhoff, Ulf; Vinzenz, Daniela; Renatus, Martin; Gerhartz, Bernd; Hommel, Ulrich; Driscoll, Paul. "Backbone 1H, 13C, and 15N resonance assignments for the 26-kD human de-ubiquitinating enzyme UCH-L3"  Biomol. NMR Assignments 1, 51-53 (2007).

Assembly members:
UCH-L3, polymer, 230 residues, 26182 Da.

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
UCH-L3: MEGQRWLPLEANPEVTNQFL KQLGLHPNWQFVDVYGMDPE LLSMVPRPVCAVLLLFPITE KYEVFRTEEEEKIKSQGQDV TSSVYFMKQTISNACGTIGL IHAIANNKDKMHFESGSTLK KFLEESVSMSPEERARYLEN YDAIRVTHETSAHEGQTEAP SIDEKVDLHFIALVHVDGHL YELDGRKPFPINHGETSDET LLEDAIEVCKKFMERDPDEL RFNAIALSAA

Data sets:
Data typeCount
13C chemical shifts591
15N chemical shifts186
1H chemical shifts186

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1UCH-L31

Entities:

Entity 1, UCH-L3 230 residues - 26182 Da.

1   METGLUGLYGLNARGTRPLEUPROLEUGLU
2   ALAASNPROGLUVALTHRASNGLNPHELEU
3   LYSGLNLEUGLYLEUHISPROASNTRPGLN
4   PHEVALASPVALTYRGLYMETASPPROGLU
5   LEULEUSERMETVALPROARGPROVALCYS
6   ALAVALLEULEULEUPHEPROILETHRGLU
7   LYSTYRGLUVALPHEARGTHRGLUGLUGLU
8   GLULYSILELYSSERGLNGLYGLNASPVAL
9   THRSERSERVALTYRPHEMETLYSGLNTHR
10   ILESERASNALACYSGLYTHRILEGLYLEU
11   ILEHISALAILEALAASNASNLYSASPLYS
12   METHISPHEGLUSERGLYSERTHRLEULYS
13   LYSPHELEUGLUGLUSERVALSERMETSER
14   PROGLUGLUARGALAARGTYRLEUGLUASN
15   TYRASPALAILEARGVALTHRHISGLUTHR
16   SERALAHISGLUGLYGLNTHRGLUALAPRO
17   SERILEASPGLULYSVALASPLEUHISPHE
18   ILEALALEUVALHISVALASPGLYHISLEU
19   TYRGLULEUASPGLYARGLYSPROPHEPRO
20   ILEASNHISGLYGLUTHRSERASPGLUTHR
21   LEULEUGLUASPALAILEGLUVALCYSLYS
22   LYSPHEMETGLUARGASPPROASPGLULEU
23   ARGPHEASNALAILEALALEUSERALAALA

Samples:

sample_1: UCH-L3, [U-100% 13C; U-100% 15N; 80% 2H], 1 mM

sample_conditions_1: ionic strength: 25 mM; pH: 7; pressure: 1 atm; temperature: 300 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CA)CBsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D HN(CA)COsample_1isotropicsample_conditions_1
3D HN(COCA)CBsample_1isotropicsample_conditions_1

Software:

ANSIG, Kraulis - chemical shift assignment

NMR spectrometers:

  • Varian UnityPlus 500 MHz

Related Database Links:

PDB
DBJ BAB20094 BAB47136 BAC34161 BAG36417
EMBL CAG33136 CAH93427
GB AAA36791 AAF64193 AAH18125 AAH48481 AAI10248
REF NP_001035631 NP_001070695 NP_001103635 NP_001253095 NP_001257881
SP P15374 Q06AB3 Q2TBG8 Q91Y78 Q9JKB1
TPG DAA23822

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts