BMRB Entry 15241

Name: 1H Chemical shift assignments for [Nle15] gastrin-17 in the presence of DPC micelles.
Published: 2007-10-29

Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR15241

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: 1H Chemical shift assignments for [Nle15] gastrin-17 in the presence of DPC micelles. PubMed: 17698249

Deposition date: 2007-05-08 Original release date: 2007-10-29

Authors: Stone, Shane; Mierke, Dale; Jackson, Graham

Citation: Stone, Shane; Mierke, Dale; Jackson, Graham. "Evidence for a C-terminal Structural Motif in Gastrin and its Bioactive Fragments in Membrane Mimetic Media." Peptides 28, 1561-1571 (2007).

Assembly members:
Nle15_Gastrin-17, polymer, 18 residues, Formula weight is not available

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: chemical synthesis

Entity Sequences (FASTA):
Nle15_Gastrin-17: XGPWLEEEEEAYGWXDFX

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	183

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	[Nle15] gastrin-17, major	1
2	[Nle15] gastrin-17, minor	1

Entities:

Entity 1, [Nle15] gastrin-17, major 18 residues - Formula weight is not available

1

PCA

GLY

PRO

TRP

LEU

GLU

2

ALA

TYR

GLY

TRP

NLE

ASP

PHE

NH2

Samples:

sample: TSP 0.1 mM; [Nle15] Gastrin-17 1.5 mM; phosphate buffer 50 mM; DPC, [U-99% 2H], 150 mM; H2O 90%; D2O, [U-99% 2H], 10%

sample_conditions_1: ionic strength: 50 mM; pH: 5.2; pressure: 1 atm; temperature: 308 K

Experiments:

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample	isotropic	sample_conditions_1

Software:

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

Bruker Avance 600 MHz