BMRB Entry 15655

Name: Solution structure of CopK, a periplasmic protein involved in copper resistance in Cupriavidus metallidurans CH34
Published: 2008-05-22

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PDB ID: 2k0q
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR15655
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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Solution structure of CopK, a periplasmic protein involved in copper resistance in Cupriavidus metallidurans CH34 PubMed: 18533181

Deposition date: 2008-02-12 Original release date: 2008-05-22

Authors: Bersch, Beate; Favier, Adrien; Schanda, Paul; Coves, Jacques; van Aelst, Sebastien; Vallaeys, Tatiana; Wattiez, Ruddy; Mergeay, Max

Citation: Bersch, Beate; Favier, Adrien; Schanda, Paul; van Aelst, Sebastien; Vallaeys, Tatiana; Coves, Jacques; Mergeay, Max; Wattiez, Ruddy. "Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge" J. Mol. Biol. 380, 386-403 (2008).

Assembly members:
CopK, polymer, 74 residues, Formula weight is not available

Natural source: Common Name: Cupriavidus metallidurans Taxonomy ID: 119219 Superkingdom: Bacteria Kingdom: not available Genus/species: Cupriavidus metallidurans

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
CopK: VDMSNVVKTYDLQDGSKVHV FKDGKMGMENKFGKSMNMPE GKVMETRDGTKIIMKGNEIF RLDEALRKGHSEGG

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1
heteronucl_NOEs
- heteronuclear_noe_list_1
heteronucl_T1_relaxation
- heteronuclear_T1_list_1
heteronucl_T2_relaxation
- heteronuclear_T2_list_1
H_exch_rates
- H_exch_rate_list_1
RDCs
- RDC_list_1

Data type	Count
13C chemical shifts	301
15N chemical shifts	77
1H chemical shifts	519
heteronuclear NOE values	68
H exchange rates	63
residual dipolar couplings	133
T1 relaxation values	62
T1rho relaxation values	65
T2 relaxation values	63

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	CopK_A	1
2	CopK_B	1

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_2	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_3	isotropic	sample_conditions_1
3D HNCO-type	sample_4	anisotropic	sample_conditions_1
relaxation	sample_2	isotropic	sample_conditions_1
3D 15N NOESY-HSQC	sample_2	isotropic	sample_conditions_1
2D-Sofast	sample_2	isotropic	sample_conditions_1
relaxation	sample_5	isotropic	sample_conditions_1

BMRB	16408 17716
PDB	2K0Q 2KM0 2LEL 3DSO 3DSP 3N7D 3N7E
EMBL	CAI11334
GB	ABF12967 EKZ95342
REF	WP_008652571 YP_145685
SP	Q58AD3

Biological Magnetic Resonance Data Bank

BMRB Entry 15655

Title: Solution structure of CopK, a periplasmic protein involved in copper resistance in Cupriavidus metallidurans CH34 PubMed: 18533181

Additional metadata:

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Entities:

Samples:

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Software:

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