BMRB Entry 15877
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PDB ID: 2k6q
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR15877
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Title: LC3 p62 complex structure PubMed: 19021777
Deposition date: 2008-07-17 Original release date: 2008-11-26
Authors: Noda, Nobuo; Kumeta, Hiroyuki; Nakatogawa, Hitoshi; Satoo, Kenji; Adachi, Wakana; Ishii, Junko; Fujioka, Yuko; Ohsumi, Yoshinori; Inagaki, Fuyuhiko
Citation: Noda, Nobuo; Kumeta, Hiroyuki; Nakatogawa, Hitoshi; Satoo, Kenji; Adachi, Wakana; Ishii, Junko; Fujioka, Yuko; Ohsumi, Yoshinori; Inagaki, Fuyuhiko. "Structural basis of target recognition by Atg8/LC3 during selective autophagy." Genes Cells 13, 1211-1218 (2008).
Assembly members:
LC3, polymer, 121 residues, 16114.414 Da.
p62_peptide, polymer, 17 residues, Formula weight is not available
Natural source: Common Name: Rat Taxonomy ID: 10116 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Rattus norvegicus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
LC3: SMPSEKTFKQRRSFEQRVED
VRLIREQHPTKIPVIIERYK
GEKQLPVLDKTKFLVPDHVN
MSELIKIIRRRLQLNANQAF
FLLVNGHSMVSVSTPISEVY
ESERDEDGFLYMVYASQETF
G
p62_peptide: MSGGDDDWTHLSSKEVD
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 621 |
| 15N chemical shifts | 146 |
| 1H chemical shifts | 1009 |
Additional metadata:
Related Database Links:
| BMRB | 18518 |
| PDB | 1UGM 1V49 2K6Q 2LUE 2Z0D 2Z0E 2ZJD 2ZZP 3VTU 3VTV 3VTW 3WAO 3X0W 4WAA 5D94 |
| DBJ | BAB15169 BAB22364 BAB22569 BAB22641 BAB22855 BAC26183 BAG35358 BAG53577 BAG65614 BAI46491 |
| EMBL | CAD38970 CAL38438 CAA69642 CAH90955 |
| GB | AAA20645 AAG09686 AAG23182 AAH18634 AAH41874 AAA93299 AAB02908 AAB17127 AAC50535 AAC52070 |
| REF | NP_001001169 NP_001078950 NP_001177219 NP_001180554 NP_001233505 NP_001125548 NP_001135770 NP_001135771 NP_001156515 NP_001253287 |
| SP | A6NCE7 O41515 Q62625 Q9CQV6 Q9GZQ8 O08623 Q13501 Q5RBA5 Q64337 |
| TPG | DAA20021 DAA28341 |
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