BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 15970

Title: SOLUTION STRUCTURE OF THE LSM DOMAIN OF DROSOPHILA MELANOGASTER TRAL (TRAILER HITCH)   PubMed: 18765641

Deposition date: 2008-10-02 Original release date: 2009-03-18

Authors: Tritschler, F.; Coles, M.; Truffault, V.

Citation: Tritschler, F.; Eulalio, A.; Helms, S.; Weichenrieder, O.; Schmidt, S.; Izaurralde, E.; Truffault, V.. "Similar Modes of Interaction Enable Trailer Hitch and Edc3 to Associate with Dcp1 and Me31B in Distinct Protein Complexes"  Mol. Cell. Biol 28, 6695-6708 (2008).

Assembly members:
TRAL-TRAILER_HITCH, polymer, 88 residues, Formula weight is not available

Natural source:   Common Name: FRUIT FLY   Taxonomy ID: 7227   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: DROSOPHILA MELANOGASTER

Experimental source:   Production method: recombinant technology   Host organism: ESCHERICHIA COLI

Entity Sequences (FASTA):
TRAL-TRAILER_HITCH: GAMAMSGGLPELGSKISLIS KADIRYEGRLYTVDPQECTI ALSSVRSFGTEDRDTQFQIA PQSQIYDYILFRGSDIKDIR VVNNHTLP

Data sets:
Data typeCount
13C chemical shifts327
15N chemical shifts71
1H chemical shifts540

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1TRAL-TRAILER HITCH1

Entities:

Entity 1, TRAL-TRAILER HITCH 88 residues - Formula weight is not available

1   GLYALAMETALAMETSERGLYGLYLEUPRO
2   GLULEUGLYSERLYSILESERLEUILESER
3   LYSALAASPILEARGTYRGLUGLYARGLEU
4   TYRTHRVALASPPROGLNGLUCYSTHRILE
5   ALALEUSERSERVALARGSERPHEGLYTHR
6   GLUASPARGASPTHRGLNPHEGLNILEALA
7   PROGLNSERGLNILETYRASPTYRILELEU
8   PHEARGGLYSERASPILELYSASPILEARG
9   VALVALASNASNHISTHRLEUPRO

Samples:

sample_1: TRAL-TRAILER HITCH, [U-15N], 0.6 mM; DTT 1 mM

sample_2: TRAL-TRAILER HITCH, [U-15N; U-13C], 0.6 mM; DTT 1 mM

sample_conditions_1: ionic strength: 150 mM; pH: 7.2; pressure: 1.0 atm; temperature: 298.0 K

Experiments:

NameSampleSample stateSample conditions
HNCACOsample_1isotropicsample_conditions_1
HNCOsample_1isotropicsample_conditions_1
HNCACBsample_1isotropicsample_conditions_1
CBCACONHsample_1isotropicsample_conditions_1
HNHAsample_1isotropicsample_conditions_1
HNHBsample_1isotropicsample_conditions_1
CCH- COSYsample_1isotropicsample_conditions_1
CCH-TOCSYsample_1isotropicsample_conditions_1
HNH-NOESYsample_1isotropicsample_conditions_1
NNH-NOESYsample_1isotropicsample_conditions_1
CNH-NOESYsample_1isotropicsample_conditions_1
HCH- NOESYsample_1isotropicsample_conditions_1

Software:

X-PLOR v2.9.4, BRUNGER - refinement

SPARKY, Goddard - structure solution

NMR spectrometers:

  • BRUKER OTHER 900 MHz

Related Database Links:

PDB
GB AAF49905 AAL39211 AGB94462 AGB94463 AGB94464
REF NP_001261769 NP_001261770 NP_001261771 NP_001261772 NP_001261773

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts