BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 15989

Title: Solution NMR structure of the R2R3 DNA binding domain of Myb1 protein from protozoan parasite Trichomonas vaginalis   PubMed: 19246540

Deposition date: 2008-10-16 Original release date: 2009-04-04

Authors: Lou, Yuan-Chao; Wei, Shu-Yi; Rajasekaran, M.; Chou, Chun-Chi; Hsu, Hong-Ming; Tai, Jung-Hsiang; Chen, Chinpan

Citation: Lou, Yuan-Chao; Wei, Shu-Yi; Rajasekaran, M.; Chou, Chun-Chi; Hsu, Hong-Ming; Tai, Jung-Hsiang; Chen, Chinpan. "NMR structural analysis of DNA recognition by a novel Myb1 DNA-binding domain in the protozoan parasite Trichomonas vaginalis"  Nucleic Acids Res. 37, 2381-2394 (2009).

Assembly members:
R2R3 DNA binding domain, polymer, 107 residues, 13218.344 Da.

Natural source:   Common Name: Trichomonas vaginalis   Taxonomy ID: 5722   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Trichomonas vaginalis

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
R2R3 DNA binding domain: KVKFTEEEDLKLQQLVMRYG AKDWIRISQLMITRNPRQCR ERWNNYINPALRTDPWSPEE DMLLDQKYAEYGPKWNKISK FLKNRSDNNIRNRWMMIARH RAKHQKS

Data sets:
Data typeCount
13C chemical shifts493
15N chemical shifts121
1H chemical shifts789
heteronuclear NOE values92

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Related Database Links:

PDB 2K9N 2KDZ
GB AAX51243 EAY03723
REF XP_001315946

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts