BMRB Entry 16164

Name: Solution structure of XcpT, the main component of the type 2 secretion system of Pseudomonas aeruginosa
Published: 2009-10-16

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PDB ID: 2kep
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR16164
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Solution structure of XcpT, the main component of the type 2 secretion system of Pseudomonas aeruginosa PubMed: 19747550

Deposition date: 2009-02-10 Original release date: 2009-10-16

Authors: Alphonse, Sebastien; Durand, Eric; Douzi, Badreddine; Darbon, Herve; Filloux, Alain; Voulhoux, Rome; Bernard, Cedric

Citation: Alphonse, Sebastien; Durand, Eric; Douzi, Badreddine; Waegele, Brigitte; Darbon, Herve; Filloux, Alain; Voulhoux, Rome; Bernard, Cedric. "Structure of the Pseudomonas aeruginosa XcpT pseudopilin, a major component of the type II secretion system." J. Struct. Biol. 169, 75-80 (2010).

Assembly members:
XcpT, polymer, 110 residues, 11957.407 Da.

Natural source: Common Name: Pseudomonas aeruginosa Taxonomy ID: 287 Superkingdom: Bacteria Kingdom: not available Genus/species: Pseudomonas aeruginosa

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
XcpT: MSRPDQAKVTVAKGDIKAIA AALDMYKLDNFAYPSTQQGL EALVKKPTGNPQPKNWNKDG YLKKLPVDPWGNPYQYLAPG TKGPFDLYSLGADGKEGGSD NDADIGNWDN

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	387
15N chemical shifts	116
1H chemical shifts	716

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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1	MET	SER	ARG	PRO	ASP	GLN	ALA	LYS	VAL	THR
2	VAL	ALA	LYS	GLY	ASP	ILE	LYS	ALA	ILE	ALA
3	ALA	ALA	LEU	ASP	MET	TYR	LYS	LEU	ASP	ASN
4	PHE	ALA	TYR	PRO	SER	THR	GLN	GLN	GLY	LEU
5	GLU	ALA	LEU	VAL	LYS	LYS	PRO	THR	GLY	ASN
6	PRO	GLN	PRO	LYS	ASN	TRP	ASN	LYS	ASP	GLY
7	TYR	LEU	LYS	LYS	LEU	PRO	VAL	ASP	PRO	TRP
8	GLY	ASN	PRO	TYR	GLN	TYR	LEU	ALA	PRO	GLY
9	THR	LYS	GLY	PRO	PHE	ASP	LEU	TYR	SER	LEU
10	GLY	ALA	ASP	GLY	LYS	GLU	GLY	GLY	SER	ASP
11	ASN	ASP	ALA	ASP	ILE	GLY	ASN	TRP	ASP	ASN

Name	Sample	Sample state	Sample conditions
2D 1H-1H TOCSY	sample_cold	isotropic	sample_conditions_2
2D 1H-1H NOESY	sample_cold	isotropic	sample_conditions_2
2D 1H-15N HSQC	sample_15N	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_15N-13C	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_15N-13C	isotropic	sample_conditions_1
3D HNCO	sample_15N-13C	isotropic	sample_conditions_1
3D HNCA	sample_15N-13C	isotropic	sample_conditions_1
3D HNCACB	sample_15N-13C	isotropic	sample_conditions_1
3D HBHA(CO)NH	sample_15N-13C	isotropic	sample_conditions_1
3D HN(CO)CA	sample_15N-13C	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_15N-13C	isotropic	sample_conditions_1
3D HNHA	sample_15N	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_15N	isotropic	sample_conditions_1
3D 1H-15N TOCSY	sample_15N	isotropic	sample_conditions_1
3D HNHB	sample_15N-13C	isotropic	sample_conditions_1
3D HCACO	sample_15N-13C	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_15N-d2O	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_15N-d2O	isotropic	sample_conditions_1

PDB	2KEP
DBJ	BAK91055 BAP22292 BAP49919 BAQ38804 BAR66863
EMBL	CAA44535 CAW26687 CCQ87087 CDH70211 CDH76300
GB	AAA25946 AAG06489 AAT49508 ABJ12333 ABR84270
REF	NP_251791 WP_003119751 WP_042115257 WP_042159357 WP_045175661
SP	Q00514

Biological Magnetic Resonance Data Bank

BMRB Entry 16164

Title: Solution structure of XcpT, the main component of the type 2 secretion system of Pseudomonas aeruginosa PubMed: 19747550

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	SER	ARG	PRO	ASP	GLN	ALA	LYS	VAL	THR
2	VAL	ALA	LYS	GLY	ASP	ILE	LYS	ALA	ILE	ALA
3	ALA	ALA	LEU	ASP	MET	TYR	LYS	LEU	ASP	ASN
4	PHE	ALA	TYR	PRO	SER	THR	GLN	GLN	GLY	LEU
5	GLU	ALA	LEU	VAL	LYS	LYS	PRO	THR	GLY	ASN
6	PRO	GLN	PRO	LYS	ASN	TRP	ASN	LYS	ASP	GLY
7	TYR	LEU	LYS	LYS	LEU	PRO	VAL	ASP	PRO	TRP
8	GLY	ASN	PRO	TYR	GLN	TYR	LEU	ALA	PRO	GLY
9	THR	LYS	GLY	PRO	PHE	ASP	LEU	TYR	SER	LEU
10	GLY	ALA	ASP	GLY	LYS	GLU	GLY	GLY	SER	ASP
11	ASN	ASP	ALA	ASP	ILE	GLY	ASN	TRP	ASP	ASN

1	MET	SER	ARG	PRO	ASP	GLN	ALA	LYS	VAL	THR
2	VAL	ALA	LYS	GLY	ASP	ILE	LYS	ALA	ILE	ALA
3	ALA	ALA	LEU	ASP	MET	TYR	LYS	LEU	ASP	ASN
4	PHE	ALA	TYR	PRO	SER	THR	GLN	GLN	GLY	LEU
5	GLU	ALA	LEU	VAL	LYS	LYS	PRO	THR	GLY	ASN
6	PRO	GLN	PRO	LYS	ASN	TRP	ASN	LYS	ASP	GLY
7	TYR	LEU	LYS	LYS	LEU	PRO	VAL	ASP	PRO	TRP
8	GLY	ASN	PRO	TYR	GLN	TYR	LEU	ALA	PRO	GLY
9	THR	LYS	GLY	PRO	PHE	ASP	LEU	TYR	SER	LEU
10	GLY	ALA	ASP	GLY	LYS	GLU	GLY	GLY	SER	ASP
11	ASN	ASP	ALA	ASP	ILE	GLY	ASN	TRP	ASP	ASN

1	MET	SER	ARG	PRO	ASP	GLN	ALA	LYS	VAL	THR
2	VAL	ALA	LYS	GLY	ASP	ILE	LYS	ALA	ILE	ALA
3	ALA	ALA	LEU	ASP	MET	TYR	LYS	LEU	ASP	ASN
4	PHE	ALA	TYR	PRO	SER	THR	GLN	GLN	GLY	LEU
5	GLU	ALA	LEU	VAL	LYS	LYS	PRO	THR	GLY	ASN
6	PRO	GLN	PRO	LYS	ASN	TRP	ASN	LYS	ASP	GLY
7	TYR	LEU	LYS	LYS	LEU	PRO	VAL	ASP	PRO	TRP
8	GLY	ASN	PRO	TYR	GLN	TYR	LEU	ALA	PRO	GLY
9	THR	LYS	GLY	PRO	PHE	ASP	LEU	TYR	SER	LEU
10	GLY	ALA	ASP	GLY	LYS	GLU	GLY	GLY	SER	ASP
11	ASN	ASP	ALA	ASP	ILE	GLY	ASN	TRP	ASP	ASN