BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 16577

Title: Backbone Chemical Shift Assignments of Mouse HOXA13 DNA Binding Domain in Complex with DNA Duplex   PubMed: 20232265

Deposition date: 2009-10-23 Original release date: 2010-03-24

Authors: Zhang, Yonghong

Citation: Zhang, Yonghong; Thornburg, Chelsea; Stadler, H. Scott; Ames, James. "Backbone chemical shift assignments of mouse HOXA13 DNA binding domain bound to duplex DNA."  Biomol. NMR Assignments 4, 97-99 (2010).

Assembly members:
DNA_duplex_chain_1, polymer, 11 residues, Formula weight is not available
DNA_duplex_chain_2, polymer, 11 residues, Formula weight is not available
Hoxa13_DNA_binding_domain, polymer, 73 residues, 8792 Da.

Natural source:   Common Name: Mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
DNA_duplex_chain_1: CAAATAAAATC
DNA_duplex_chain_2: GATTTTATTTG
Hoxa13_DNA_binding_domain: GSHMLEGRKKRVPYTKVQLK ELEREYATNKFITKDKRRRI SATTNLSERQVTIWFQNRRV KEKKVINKLKTTS

Data sets:
Data typeCount
13C chemical shifts211
15N chemical shifts70
1H chemical shifts142

Additional metadata:

  • Assembly
  • Samples and Experiments
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  • Spectrometers
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Related Database Links:

BMRB 16252
PDB 2L7Z 2LD5
EMBL CAC44975
GB AAA86506 AAB03322 AAC50993 AAH75791 AAI00732
REF NP_000513 NP_001079321 NP_001162372 NP_001182271 NP_001258284
SP P31271 P50210 Q62424 Q90X25
TPG DAA30521

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts