BMRB Entry 16683

Name: RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide
Published: 2011-01-25

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PDB ID: 2kt5
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR16683
MolProbity Validation Chart

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide PubMed: 21253573

Deposition date: 2010-01-18 Original release date: 2011-01-25

Authors: Tunnicliffe, Richard; Golovanov, Alexander; Wilson, Stuart; Hautbergue, Guillaume

Citation: Tunnicliffe, Richard; Hautbergue, Guillaume; Kalra, Priti; Jackson, Brian; Whitehouse, Adrian; Wilson, Stuart; Golovanov, Alexander. "Structural Basis for the Recognition of Cellular mRNA Export Factor REF by Herpes Viral Proteins HSV-1 ICP27 and HVS ORF57." PLoS Pathog. 7, e1001244-. (2011).

Assembly members:
REF_54-155, polymer, 124 residues, 13596.237 Da.
ICP27_103-138, polymer, 40 residues, 4268.970 Da.

Natural source: Common Name: Mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
REF_54-155: MASMTGGQQMGRDPDKWQHD LFDSGCGGGEGVETGAKLLV SNLDFGVSDADIQELFAEFG TLKKAAVDYDRSGRSLGTAD VHFERRADALKAMKQYKGVP LDGRPMDIQLVASQIDLEHH HHHH
ICP27_103-138: GPLGSVWSRLGARRPSCSPE RHGGKVARLQPPPTKAQPAR

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	627
15N chemical shifts	159
1H chemical shifts	1049

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	REF_54-155	1
2	ICP27_103-138	2

1	GLY	PRO	LEU	GLY	SER	VAL	TRP	SER	ARG	LEU
2	GLY	ALA	ARG	ARG	PRO	SER	CYS	SER	PRO	GLU
3	ARG	HIS	GLY	GLY	LYS	VAL	ALA	ARG	LEU	GLN
4	PRO	PRO	PRO	THR	LYS	ALA	GLN	PRO	ALA	ARG

Name	Sample	Sample state	Sample conditions
3D 13C-separated NOESY	sample_1	isotropic	sample_conditions
3D 15N-separated NOESY	sample_1	isotropic	sample_conditions
filtered 13C-NOESY	sample_1	isotropic	sample_conditions
filtered 13C-NOESY	sample_2	isotropic	sample_conditions
3D 13C-separated NOESY	sample_2	isotropic	sample_conditions
3D 15N-separated NOESY	sample_2	isotropic	sample_conditions
3D Standard triple-resonance	sample_1	isotropic	sample_conditions
3d Standard triple-resonance	sample_2	isotropic	sample_conditions

BMRB	16697 17693 16696
PDB	2KT5 2YKA 2KT5
DBJ	BAE44978 BAE44979 BAE44980 BAE44981 BAE44982
EMBL	CAA32290
GB	AAF43147 ACM62278 ACU57136 ADD60047 ADD60124
REF	NP_044657
SP	P10238 P36295

Biological Magnetic Resonance Data Bank

BMRB Entry 16683

Title: RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide PubMed: 21253573

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	PRO	LEU	GLY	SER	VAL	TRP	SER	ARG	LEU
2	GLY	ALA	ARG	ARG	PRO	SER	CYS	SER	PRO	GLU
3	ARG	HIS	GLY	GLY	LYS	VAL	ALA	ARG	LEU	GLN
4	PRO	PRO	PRO	THR	LYS	ALA	GLN	PRO	ALA	ARG

1	GLY	PRO	LEU	GLY	SER	VAL	TRP	SER	ARG	LEU
2	GLY	ALA	ARG	ARG	PRO	SER	CYS	SER	PRO	GLU
3	ARG	HIS	GLY	GLY	LYS	VAL	ALA	ARG	LEU	GLN
4	PRO	PRO	PRO	THR	LYS	ALA	GLN	PRO	ALA	ARG

1	GLY	PRO	LEU	GLY	SER	VAL	TRP	SER	ARG	LEU
2	GLY	ALA	ARG	ARG	PRO	SER	CYS	SER	PRO	GLU
3	ARG	HIS	GLY	GLY	LYS	VAL	ALA	ARG	LEU	GLN
4	PRO	PRO	PRO	THR	LYS	ALA	GLN	PRO	ALA	ARG