BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 16729

Title: NMR assignment of Salmonella typhimurium tip protein SipD   PubMed: 20397637

Deposition date: 2010-02-16 Original release date: 2010-05-03

Authors: Wang, Yu; Nordhues, Bryce; Zhong, Dalian; De Guzman, Roberto

Citation: Wang, Yu; Nordhues, Bryce; Zhong, Dalian; De Guzman, Roberto. "NMR characterization of the interaction of the Salmonella type III secretion system protein SipD and bile salts."  Biochemistry 49, 4220-4226 (2010).

Assembly members:
SipD, polymer, 343 residues, Formula weight is not available

Natural source:   Common Name: Salmonella typhimurium   Taxonomy ID: 90371   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Salmonella typhimurium

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
SipD: MLNIQNYSASPHPGIVAERP QTPSASEHVETAVVPSTTEH RGTDIISLSQAATKIHQAQQ TLQSTPPISEENNDERTLAR QQLTSSLNALAKSGVSLSAE QNENLRSAFSAPTSALFSAS PMAQPRTTISDAEIWDMVSQ NISAIGDSYLGVYENVVAVY TDFYQAFSDILSKMGGWLLP GKDGNTVKLDVTSLKNDLNS LVNKYNQINSNTVLFPAQSG SGVKVATEAEARQWLSELNL PNSCLKSYGSGYVVTVDLTP LQKMVQDIDGLGAPGKDSKL EMDNAKYQAWQSGFKAQEEN MKTTLQTLTQKYSNANSLYD NLVKVLSSTISSSLETAKSF LQG

Data sets:
Data typeCount
13C chemical shifts801
15N chemical shifts274
1H chemical shifts265

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Related Database Links:

PDB 2YM0 2YM9 3NZZ 3O00 3O01 3O02 3ZQB 3ZQE
DBJ BAJ37875 BAP08788
EMBL CAR34302 CAR38594 CBG25852 CBW18960 CBY97053
GB AAA86617 AAC43548 AAL21763 AAX66721 ABX68926
REF NP_461804 WP_000932241 WP_000932242 WP_000932245 WP_000932246
SP Q56026

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts