BMRB Entry 16778

Name: Solution structure of the CBX7 chromodomain in complex with a H3K27me2 peptide
Published: 2011-05-26

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PDB ID: 2kvm
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR16778
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Solution structure of the CBX7 chromodomain in complex with a H3K27me2 peptide PubMed: 20541999

Deposition date: 2010-03-17 Original release date: 2011-05-26

Authors: Yap, Kyoko; Zeng, Lei; Zhou, Ming-Ming

Citation: Yap, Kyoko; Li, Side; Munoz-Cabello, Ana; Raguz, Selina; Zeng, Lei; Mujtaba, Shiraz; Gil, Jesus; Walsh, Martin; Zhou, Ming-Ming. "Molecular interplay of the noncoding RNA ANRIL and methylated histone H3 lysine 27 by polycomb CBX7 in transcriptional silencing of INK4a" Mol. Cell 38, 662-674 (2010).

Assembly members:
CBX7_chromodomain, polymer, 71 residues, 8555.949 Da.
H3K27me2_peptide, polymer, 16 residues, 1726.093 Da.

Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: not available Kingdom: not available Genus/species: not available not available

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
CBX7_chromodomain: MELSAIGEQVFAVESIRKKR VRKGKVEYLVKWKGWPPKYS TWEPEEHILDPRLVMAYEEK EERDRASGYRK
H3K27me2_peptide: APRKQLATKAARXSAP

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	308
15N chemical shifts	68
1H chemical shifts	631

Additional metadata:

Assembly
Samples and Experiments
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Entity Assembly ID	Entity Name	Entity ID
1	CBX7_chromodomain	1
2	H3K27me2_peptide	2

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
2D 1H-1H TOCSY	sample_3	isotropic	sample_conditions_1
3D HNCACB	sample_2	isotropic	sample_conditions_1
3D HN(COCA)CB	sample_2	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_2	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1

BMRB	15674 17072 17079 6997
PDB	2K1B 2KVM 2L12 2L1B 4MN3 1PDQ 2G46 2KVM 3N9P
DBJ	BAI46775 BAM62356
GB	AAH21398 AAH51773 AAH62392 AAR26721 AAX94038 AAY18719 ABB83163 ABL95239 ABL95241 ABN80289
REF	NP_001179547 NP_001247702 NP_659060 NP_783640 NP_954548
SP	O95931 P60889 Q8VDS3
TPG	DAA29144

Biological Magnetic Resonance Data Bank

BMRB Entry 16778

Title: Solution structure of the CBX7 chromodomain in complex with a H3K27me2 peptide PubMed: 20541999

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