BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 17231

Title: Resonance assignments of ArsD   PubMed: 21063813

Deposition date: 2010-10-01 Original release date: 2010-11-15

Authors: Ye, Jun; He, Yanan; Skalicky, Jack; Rosen, Barry; Stemmler, Timothy

Citation: Ye, Jun; He, Yanan; Skalicky, Jack; Rosen, Barry; Stemmler, Timothy. "Resonance assignments and secondary structure prediction of the As(III) metallochaperone ArsD in solution."  Biomol. NMR Assignments 5, 109-112 (2011).

Assembly members:
ArsD, polymer, 124 residues, Formula weight is not available

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
ArsD: MKTLMVFDPAMCCSTGVCGT DVDQALVDFSTDVQWLKQCG VQIERFNLAQQPMSFVQNEK VKAFIEASGAEGLPLLLLDG ETVMAGRYPKRAELARWFGI PLDKVGLAPSGCCGGNTSHH HHHH

Data sets:
Data typeCount
13C chemical shifts336
15N chemical shifts109
1H chemical shifts109

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1ArsD_11
2ArsD_21

Entities:

Entity 1, ArsD_1 124 residues - Formula weight is not available

1   METLYSTHRLEUMETVALPHEASPPROALA
2   METCYSCYSSERTHRGLYVALCYSGLYTHR
3   ASPVALASPGLNALALEUVALASPPHESER
4   THRASPVALGLNTRPLEULYSGLNCYSGLY
5   VALGLNILEGLUARGPHEASNLEUALAGLN
6   GLNPROMETSERPHEVALGLNASNGLULYS
7   VALLYSALAPHEILEGLUALASERGLYALA
8   GLUGLYLEUPROLEULEULEULEUASPGLY
9   GLUTHRVALMETALAGLYARGTYRPROLYS
10   ARGALAGLULEUALAARGTRPPHEGLYILE
11   PROLEUASPLYSVALGLYLEUALAPROSER
12   GLYCYSCYSGLYGLYASNTHRSERHISHIS
13   HISHISHISHIS

Samples:

sample_1: ArsD, [U-98% 13C; U-98% 15N], 1 mM; potassium phosphate 20 mM; sodium chloride 100 mM; DTT 5 mM; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 0.22 M; pH: 6.0; pressure: 1 atm; temperature: 293 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D C(CO)NHsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D CBCA(CO)NHsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

  • Varian INOVA 720 MHz

Related Database Links:

PDB
DBJ BAB91570
EMBL CSO49052
GB AAA93060 AJE59284 KNW56142
REF NP_863362 WP_011117596 WP_032488785 YP_009074720
SP P46003

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts