BMRB Entry 17283

Name: Sequence-specific 1H, 13C and 15N assignments of the phosphoesterase (PE) domain of Pseudomonas aeruginosa DNA ligase D (LigD)
Published: 2011-01-18

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PDB ID: 2lj6
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17283
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Sequence-specific 1H, 13C and 15N assignments of the phosphoesterase (PE) domain of Pseudomonas aeruginosa DNA ligase D (LigD) PubMed: 21213076

Deposition date: 2010-11-03 Original release date: 2011-01-18

Authors: Dutta, Kaushik; Natarajan, Aswin; Ghose, Ranajeet

Citation: Dutta, Kaushik; Natarajan, Aswin; Nair, Pravin; Shuman, Stewart; Ghose, Ranajeet. "Sequence-specific 1H, 13C and 15N assignments of the phosphoesterase (PE) domain of Pseudomonas aeruginosa DNA ligase D (LigD)." Biomol. NMR Assignments 5, 151-155 (2011).

Assembly members:
Pae177, polymer, 177 residues, Formula weight is not available

Natural source: Common Name: Pseudomonas aeruginosa Taxonomy ID: 287 Superkingdom: Bacteria Kingdom: not available Genus/species: Pseudomonas aeruginosa

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
Pae177: MPSSKPLAEYARKRDFRQTP EPSGRKPRKDSTGLLRYCVQ KHDASRLHYDFRLELDGTLK SWAVPKGPCLDPAVKRLAVQ VEDHPLDYADFEGSIPQGHY GAGDVIVWDRGAWTPLDDPR EGLEKGHLSFALDGEKLSGR WHLIRTNLRGKQSQWFLVKA KDGEARSLDRFDVLKER

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	580
15N chemical shifts	150
1H chemical shifts	840

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	NMR_Sample_1	isotropic	NMR
2D 1H-15N HSQC	NMR_Sample_2	isotropic	NMR
2D 1H-15N HSQC	NMR_Sample_3	isotropic	NMR
3D HN(COCA)CB	NMR_Sample_1	isotropic	NMR
3D HNCACB	NMR_Sample_3	isotropic	NMR
3D C(CO)NH	NMR_Sample_1	isotropic	NMR
3D H(CCO)NH	NMR_Sample_1	isotropic	NMR
3D HNCO	NMR_Sample_3	isotropic	NMR
3D HNCA	NMR_Sample_3	isotropic	NMR
3D TROSY	NMR_Sample_3	isotropic	NMR
3D HNCOCACB	NMR_Sample_3	isotropic	NMR
3D HNCOCA	NMR_Sample_3	isotropic	NMR
3D HNCACO	NMR_Sample_3	isotropic	NMR
3D CC(CO)NH	NMR_Sample_2	isotropic	NMR
3D HC(CO)NH	NMR_Sample_2	isotropic	NMR
3D HBHACONH	NMR_Sample_2	isotropic	NMR

PDB	2LJ6 3N9B 3N9D
DBJ	BAK89966 BAP23425 BAP51031 BAQ40184 BAR68071
EMBL	CAW27916 CDH77490 CDM46092 CDO81319 CEI20600
GB	AAG05526 ABJ11315 AEO75385 AFM65275 AGI81805
REF	NP_250828 WP_003109866 WP_003113639 WP_003124692 WP_003158695
SP	Q9I1X7

Biological Magnetic Resonance Data Bank

BMRB Entry 17283

Title: Sequence-specific 1H, 13C and 15N assignments of the phosphoesterase (PE) domain of Pseudomonas aeruginosa DNA ligase D (LigD) PubMed: 21213076

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