BMRB Entry 17364

Name: The solution structure of the PTB Domain of TENC1 in complex with the peptide of DLC1
Published: 2012-06-04

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PDB ID: 2loz
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17364
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: The solution structure of the PTB Domain of TENC1 in complex with the peptide of DLC1 PubMed: 22645138

Deposition date: 2010-12-14 Original release date: 2012-06-04

Authors: Liu, Changdong; Chen, Lihong; Feng, Rui; Zhu, Guang

Citation: Chen, Lihong; Liu, Changdong; Ko, Frankie Chi Fat; Xu, Naining; Ng, Irene Oi-Lin; Yam, Judy Wai Ping; Zhu, Guang. "Solution structure of the phosphotyrosine binding (PTB) domain of human tensin2 protein in complex with deleted in liver cancer 1 (DLC1) peptide reveals a novel peptide binding mode." J. Biol. Chem. 287, 26104-26114 (2012).

Assembly members:
PTB_domian, polymer, 147 residues, 15983.273 Da.
DLC1_peptide, polymer, 21 residues, 2243.518 Da.

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
PTB_domian: MSTAADLLRQGAACSVLYLT SVETESLTGPQAVARASSAA LSCSPRPTPAVVHFKVSAQG ITLTDNQRKLFFRRHYPVNS ITFSSTDPQDRRWTNPDGTT SKIFGFVAKKPGSPWENVCH LFAELDPDQPAGAIVTFITK VLLGQRK
DLC1_peptide: IPEDHKPGTFPKALTNGSFS P

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	484
15N chemical shifts	133
1H chemical shifts	992

Additional metadata:

Assembly
Samples and Experiments
Software
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Entity Assembly ID	Entity Name	Entity ID
1	PTB domian	1
2	DLC1 peptide	2

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_2	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D H(CCO)NH	sample_1	isotropic	sample_conditions_1
3D C(CO)NH	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
3D HCCH-COSY	sample_2	isotropic	sample_conditions_1
3D HCCH-TOCSY	sample_2	isotropic	sample_conditions_1
3D 1H-13C NOESY	sample_2	isotropic	sample_conditions_1
3D 13C/15N filtered-13C edited NOESY	sample_2	isotropic	sample_conditions_1

BMRB	10318
PDB	2DKQ 2LOZ 3HQC 2LOZ
DBJ	BAA83027 BAG09960 BAG54765 BAB21814 BAF82423 BAF84371 BAG10131 BAG61122
EMBL	CAB70815 CAH56176
GB	AAH54099 AAI10855 AAI29829 AAI29830 AAI31504 AAB81637 AAB87700 AAH54511 AAK97501 ACE86794
REF	NP_056134 NP_736610 NP_938072 XP_001102202 XP_001790253 NP_001157743 NP_006085 NP_872584 XP_001092830 XP_003256738
SP	Q63HR2 Q96QB1
TPG	DAA29990
PIR	G59435

Biological Magnetic Resonance Data Bank

BMRB Entry 17364

Title: The solution structure of the PTB Domain of TENC1 in complex with the peptide of DLC1 PubMed: 22645138

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