BMRB Entry 17761
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR17761
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Backbone 1H, 13C, 15N and 13CB assignment of N-terminal Domain of Ribosomal Protein L9 (NTL9) Denatured State in 8.3M Urea PubMed: 21915914
Deposition date: 2011-07-05 Original release date: 2012-09-20
Authors: Meng, Wenli; Raleigh, Daniel
Citation: Meng, Wenli; Raleigh, Daniel. "Analysis of electrostatic interactions in the denatured state ensemble of the N-terminal domain of L9 under native conditions." Proteins 79, 3500-3510 (2011).
Assembly members:
N-terminal Domain of the Ribosomal Protein L9, polymer, 56 residues, Formula weight is not available
Natural source: Common Name: Geobacillus stearothermophilus Taxonomy ID: 1422 Superkingdom: Bacteria Kingdom: not available Genus/species: Geobacillus stearothermophilus
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
N-terminal Domain of the Ribosomal Protein L9: MKVIFLKDVKGKGKKGEIKN
VADGYANNFLFKQGLAIEAT
PANLKALEAQKQKEQR
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 161 |
15N chemical shifts | 54 |
1H chemical shifts | 108 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | N-terminal Domain of the Ribosomal Protein L9 | 1 |
Entities:
Entity 1, N-terminal Domain of the Ribosomal Protein L9 56 residues - Formula weight is not available
1 | MET | LYS | VAL | ILE | PHE | LEU | LYS | ASP | VAL | LYS | ||||
2 | GLY | LYS | GLY | LYS | LYS | GLY | GLU | ILE | LYS | ASN | ||||
3 | VAL | ALA | ASP | GLY | TYR | ALA | ASN | ASN | PHE | LEU | ||||
4 | PHE | LYS | GLN | GLY | LEU | ALA | ILE | GLU | ALA | THR | ||||
5 | PRO | ALA | ASN | LEU | LYS | ALA | LEU | GLU | ALA | GLN | ||||
6 | LYS | GLN | LYS | GLU | GLN | ARG |
Samples:
sample_1: sodium chloride 100 mM; sodium acetate 20 mM; urea 8.3 M; DSS 0.4 mM; N-terminal Domain of the Ribosomal Protein L9, [U-100% 13C; U-100% 15N], 1 mM; H2O 90%; D2O 10%
sample_2: sodium chloride 100 mM; sodium acetate 20 mM; urea 8.3 M; DSS 0.4 mM; N-terminal Domain of the Ribosomal Protein L9, [U-100% 15N], 1 mM; H2O 90%; D2O 10%
sample_conditions_1: ionic strength: 0.12 M; pH: 5.5; pressure: 1 atm; temperature: 285 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
2D 1H-15N HSQC | sample_2 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N TOCSY | sample_2 | isotropic | sample_conditions_1 |
Software:
NMRView, Johnson, One Moon Scientific - chemical shift assignment
NMR spectrometers:
- Bruker Avance 500 MHz
Related Database Links:
BMRB | 17460 17506 4551 |
PDB | |
EMBL | CAA43972 |
GB | AAA22701 ABO68755 AGT33858 AKM20686 AKU26730 |
PRF | 0701226A 1714237A |
REF | WP_008880809 WP_011888453 WP_020961638 WP_033008865 WP_050368025 |
SP | A4ITV1 P02417 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts