BMRB Entry 18049

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Title: Low resolution structure of RNA-binding subunit of the TRAMP complex   PubMed: 22402490

Deposition date: 2011-11-10 Original release date: 2012-03-19

Authors: Holub, Peter; Lalakova, Jana; Cerna, Hana; Sarazova, Marie; Pasulka, Josef; Hrazdilova, Kristyna; Arce, Maria; Stefl, Richard; Vanacova, Stepanka

Citation: Holub, Peter; Lalakova, Jana; Cerna, Hana; Pasulka, Josef; Sarazova, Marie; Hrazdilova, Kristyna; Arce, Maria Sanudo; Hobor, Fruzsina; Stefl, Richard; Vanacova, Stepanka. "Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation."  Nucleic Acids Res. 40, 5679-5693 (2012).

Assembly members:
RNA-binding subunit of the TRAMP complex, polymer, 124 residues, 14263.607 Da.
ZINC ION, non-polymer, 65.409 Da.

Natural source:   Common Name: baker   Taxonomy ID: 4932   Superkingdom: not available   Kingdom: not available   Genus/species: Eukaryota Fungi

Experimental source:   Production method: recombinant technology   Host organism: Saccharomyces cerevisiae

Entity Sequences (FASTA):
RNA-binding subunit of the TRAMP complex: KEAAPKCNNCSQRGHLKKDC PHIICSYCGATDDHYSRHCP KAIQCSKCDEVGHYRSQCPH KWKKVQCTLCKSKKHSKERC PSIWRAYILVDDNEKAKPKV LPFHTIYCYNCGGKGHFGDD CKEK

Additional metadata:

• Assembly
• Samples and Experiments
• Software
• Spectrometers
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Related Database Links:

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts