BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18518

Title: LC3B OPTN-LIR Ptot complex structure   PubMed: 23805866

Deposition date: 2012-06-13 Original release date: 2013-07-15

Authors: Rogov, Vladimir; Rozenknop, Alexis; Loehr, Frank; Guentert, Peter; Doetsch, Volker

Citation: Rogov, Vladimir; Suzuki, Hironori; Fiskin, Evgenij; Wild, Philipp; Kniss, Andreas; Rozenknop, Alexis; Kato, Ryuichi; Kawasaki, Masato; McEwan, David; Lohr, Frank; Guntert, Peter; Dikic, Ivan; Wakatsuki, Soichi; Dotsch, Volker. "Structural basis for phosphorylation-triggered autophagic clearance of Salmonella."  Biochem. J. 454, 459-466 (2013).

Assembly members:
entity_1, polymer, 119 residues, 13965.232 Da.
entity_2, polymer, 17 residues, 2245.827 Da.

Natural source:   Common Name: Humans   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
entity_1: GAMGKTFKQRRTFEQRVEDV RLIREQHPTKIPVIIERYKG EKQLPVLDKTKFLVPDHVNM SELIKIIRRRLQLNANQAFF LLVNGHSMVSVSTPISEVYE SEKDEDGFLYMVYASQETF
entity_2: NXXGXXEDXFVEIRMAE

Data sets:
Data typeCount
13C chemical shifts548
15N chemical shifts141
1H chemical shifts1028

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Related Database Links:

UNP Q9GZQ8 Q96CV9
BMRB 15877
PDB 1UGM 1V49 2K6Q 2LUE 2Z0D 2Z0E 2ZJD 2ZZP 3VTU 3VTV 3VTW 3WAO 3X0W 4WAA 5D94
DBJ BAB15169 BAB22364 BAB22569 BAB22641 BAB22855
EMBL CAD38970 CAG31435 CAL38438
GB AAA20645 AAB72082 AAG09686 AAG23182 AAH18634
REF NP_001001169 NP_001026632 NP_001078950 NP_001177219 NP_001180554
SP A6NCE7 O41515 Q62625 Q9CQV6 Q9GZQ8
TPG DAA20021

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts