BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18540

Title: NMR solution structure of midkine-a   PubMed: 23418741

Deposition date: 2012-06-21 Original release date: 2013-04-02

Authors: Lim, Jackwee; Yang, Daiwen; Meng, Dan

Citation: Lim, Jackwee; Yao, Sheng; Graf, Martin; Winkler, Christoph; Yang, Daiwen. "Structure-function analysis of full-length midkine reveals novel residues important for heparin binding and zebrafish embryogenesis."  Biochem. J. 451, 407-415 (2013).

Assembly members:
midkine-a, polymer, 125 residues, 13548.584 Da.

Natural source:   Common Name: Zebrafish   Taxonomy ID: 7955   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Danio rerio

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
midkine-a: GSKNKKEKNKGGKGGADCAE WLYGSCVANNGDCGQGMREG TCNEQTRKVKCRVPCNWKKE FGADCKYKFGNWGECDAATS TKSRTGTLQKALFNVECQQT VSVTKPCTTKVKNKPKGKKG KGKGN

Data sets:
Data typeCount
13C chemical shifts367
15N chemical shifts122
1H chemical shifts628

Additional metadata:

  • Assembly
  • Samples and Experiments
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  • Spectrometers
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Related Database Links:

PDB 2LUT
GB AAD38157 AAH71342 AAM27446 AJG05945
REF NP_571145

Download simulated HSQC data in one of the following formats:
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SPARKY: Backbone or all simulated shifts