BMRB Entry 18557

Name: Solution structure of Ca2+-bound CaBP7 N-terminal doman
Published: 2012-09-25

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PDB ID: 2lv7
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR18557
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Solution structure of Ca2+-bound CaBP7 N-terminal doman PubMed: 22989873

Deposition date: 2012-06-29 Original release date: 2012-09-25

Authors: McCue, Hannah; Patel, Pryank; Herbert, Andrew; Lian, Lu-Yun; Burgoyne, Robert; Haynes, Lee

Citation: McCue, Hannah; Patel, Pryank; Herbert, Andrew; Lian, Lu-Yun; Burgoyne, Robert; Haynes, Lee. "Solution NMR structure of the Ca2+-bound N-terminal domain of CaBP7: a regulator of golgi trafficking." J. Biol. Chem. 287, 38231-38243 (2012).

Assembly members:
CaBP7_N-terminal_Domain, polymer, 100 residues, 11400.962 Da.
CALCIUM ION, non-polymer, 40.078 Da.

Natural source: Common Name: Humans Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
CaBP7_N-terminal_Domain: MPFHPVTAALMYRGIYTVPN LLSEQRPVDIPEDELEEIRE AFKVFDRDGNGFISKQELGT AMRSLGYMPNEVELEVIIQR LDMDGDGQVDFEEFVTLLGP

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	377
15N chemical shifts	88
1H chemical shifts	590

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	CaBP7 N-terminal doman	1
2	Calcium ion 1	2
3	Calcium ion 2	2

1	MET	PRO	PHE	HIS	PRO	VAL	THR	ALA	ALA	LEU
2	MET	TYR	ARG	GLY	ILE	TYR	THR	VAL	PRO	ASN
3	LEU	LEU	SER	GLU	GLN	ARG	PRO	VAL	ASP	ILE
4	PRO	GLU	ASP	GLU	LEU	GLU	GLU	ILE	ARG	GLU
5	ALA	PHE	LYS	VAL	PHE	ASP	ARG	ASP	GLY	ASN
6	GLY	PHE	ILE	SER	LYS	GLN	GLU	LEU	GLY	THR
7	ALA	MET	ARG	SER	LEU	GLY	TYR	MET	PRO	ASN
8	GLU	VAL	GLU	LEU	GLU	VAL	ILE	ILE	GLN	ARG
9	LEU	ASP	MET	ASP	GLY	ASP	GLY	GLN	VAL	ASP
10	PHE	GLU	GLU	PHE	VAL	THR	LEU	LEU	GLY	PRO

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	15N_CaBP7	isotropic	sample_condition_1
2D 1H-13C HSQC	13C-15N_CaBP7	isotropic	sample_condition_1
3D CBCA(CO)NH	13C-15N_CaBP7	isotropic	sample_condition_1
3D HNCO	13C-15N_CaBP7	isotropic	sample_condition_1
3D HNCA	13C-15N_CaBP7	isotropic	sample_condition_1
3D HNCACB	13C-15N_CaBP7	isotropic	sample_condition_1
3D HBHA(CO)NH	13C-15N_CaBP7	isotropic	sample_condition_1
3D HN(CO)CA	13C-15N_CaBP7	isotropic	sample_condition_1
3D HCCH-TOCSY	13C-15N_CaBP7	isotropic	sample_condition_1
3D 1H-15N NOESY	13C-15N_CaBP7	isotropic	sample_condition_1
3D 1H-13C NOESY	13C-15N_CaBP7	isotropic	sample_condition_1
3D 1H-13C NOESY aromatic	13C-15N_CaBP7	isotropic	sample_condition_1
2D 1H-13C HSQC aromatic	13C-15N_CaBP7	isotropic	sample_condition_1
3D HN(COCA)CB	13C-15N_CaBP7	isotropic	sample_condition_1
2D 1H-15N HSQC	15N_CaBP7_D2O	isotropic	sample_condition_1
2D 1H-15N HSQC	15N_CaBP7_Pf1	anisotropic	sample_condition_1

PDB	2LV7
EMBL	CAG08146 CDQ61254 CDQ73336
GB	AAH51805 AAH81959 AAI04357 AAI04358 AAL14997
REF	NP_001007731 NP_620398 NP_872333 XP_001234278 XP_002707748
SP	Q66H96 Q866X0 Q86V35 Q91ZM8

Biological Magnetic Resonance Data Bank

BMRB Entry 18557

Title: Solution structure of Ca2+-bound CaBP7 N-terminal doman PubMed: 22989873

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	PRO	PHE	HIS	PRO	VAL	THR	ALA	ALA	LEU
2	MET	TYR	ARG	GLY	ILE	TYR	THR	VAL	PRO	ASN
3	LEU	LEU	SER	GLU	GLN	ARG	PRO	VAL	ASP	ILE
4	PRO	GLU	ASP	GLU	LEU	GLU	GLU	ILE	ARG	GLU
5	ALA	PHE	LYS	VAL	PHE	ASP	ARG	ASP	GLY	ASN
6	GLY	PHE	ILE	SER	LYS	GLN	GLU	LEU	GLY	THR
7	ALA	MET	ARG	SER	LEU	GLY	TYR	MET	PRO	ASN
8	GLU	VAL	GLU	LEU	GLU	VAL	ILE	ILE	GLN	ARG
9	LEU	ASP	MET	ASP	GLY	ASP	GLY	GLN	VAL	ASP
10	PHE	GLU	GLU	PHE	VAL	THR	LEU	LEU	GLY	PRO

1	MET	PRO	PHE	HIS	PRO	VAL	THR	ALA	ALA	LEU
2	MET	TYR	ARG	GLY	ILE	TYR	THR	VAL	PRO	ASN
3	LEU	LEU	SER	GLU	GLN	ARG	PRO	VAL	ASP	ILE
4	PRO	GLU	ASP	GLU	LEU	GLU	GLU	ILE	ARG	GLU
5	ALA	PHE	LYS	VAL	PHE	ASP	ARG	ASP	GLY	ASN
6	GLY	PHE	ILE	SER	LYS	GLN	GLU	LEU	GLY	THR
7	ALA	MET	ARG	SER	LEU	GLY	TYR	MET	PRO	ASN
8	GLU	VAL	GLU	LEU	GLU	VAL	ILE	ILE	GLN	ARG
9	LEU	ASP	MET	ASP	GLY	ASP	GLY	GLN	VAL	ASP
10	PHE	GLU	GLU	PHE	VAL	THR	LEU	LEU	GLY	PRO

1	MET	PRO	PHE	HIS	PRO	VAL	THR	ALA	ALA	LEU
2	MET	TYR	ARG	GLY	ILE	TYR	THR	VAL	PRO	ASN
3	LEU	LEU	SER	GLU	GLN	ARG	PRO	VAL	ASP	ILE
4	PRO	GLU	ASP	GLU	LEU	GLU	GLU	ILE	ARG	GLU
5	ALA	PHE	LYS	VAL	PHE	ASP	ARG	ASP	GLY	ASN
6	GLY	PHE	ILE	SER	LYS	GLN	GLU	LEU	GLY	THR
7	ALA	MET	ARG	SER	LEU	GLY	TYR	MET	PRO	ASN
8	GLU	VAL	GLU	LEU	GLU	VAL	ILE	ILE	GLN	ARG
9	LEU	ASP	MET	ASP	GLY	ASP	GLY	GLN	VAL	ASP
10	PHE	GLU	GLU	PHE	VAL	THR	LEU	LEU	GLY	PRO