BMRB Entry 18617

Name: Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide
Published: 2012-12-04

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PDB ID: 2lwa
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR18617
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide PubMed: 23169643

Deposition date: 2012-07-26 Original release date: 2012-12-04

Authors: Lorieau, Justin; Louis, John; Schwieters, Charles; Bax, Ad

Citation: Lorieau, Justin; Louis, John; Schwieters, Charles; Bax, Ad. "pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR" Proc. Natl. Acad. Sci. U. S. A. 109, 19994-19999 (2012).

Assembly members:
Hemagglutinin_Fusion_Peptide_G8A_mutant, polymer, 30 residues, 3165.648 Da.

Natural source: Common Name: Influenza A virus Taxonomy ID: 11320 Superkingdom: Viruses Kingdom: not available Genus/species: Influenzavirus A Influenza A virus

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
Hemagglutinin_Fusion_Peptide_G8A_mutant: GLFGAIAAFIEGGWTGMIDG WYGSGKKKKD

pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR.

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Molecular graphics and analyses were performed with the UCSF Chimera package. Chimera is developed by the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco (supported by NIGMS P41-GM103311).
UCSF Chimera--a visualization system for exploratory research and analysis. Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE. J Comput Chem. 2004 Oct;25(13):1605-12.
JSmol: an open-source HTML5 viewer for chemical structures in 3D.

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	23
15N chemical shifts	21
1H chemical shifts	51
heteronuclear NOE values	21
H exchange rates	21
T1 relaxation values	42
T2 relaxation values	42

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Entity Assembly ID	Entity Name	Entity ID
1	Hemagglutinin_Fusion_Peptide_G8A_mutant, strand 1	1
2	Hemagglutinin_Fusion_Peptide_G8A_mutant, strand 2	1
3	Hemagglutinin_Fusion_Peptide_G8A_mutant, strand 3	1

1	GLY	LEU	PHE	GLY	ALA	ILE	ALA	ALA	PHE	ILE
2	GLU	GLY	GLY	TRP	THR	GLY	MET	ILE	ASP	GLY
3	TRP	TYR	GLY	SER	GLY	LYS	LYS	LYS	LYS	ASP

Name	Sample	Sample state	Sample conditions
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
3D HNCA	sample_1	isotropic	sample_conditions_1
3D 1H-15N NOESY	sample_1	isotropic	sample_conditions_1
2D 1H-1H NOESY	sample_1	isotropic	sample_conditions_1

PDB	2LWA
GB	AEL63841

Biological Magnetic Resonance Data Bank

BMRB Entry 18617

Title: Conformational ensemble for the G8A mutant of the influenza hemagglutinin fusion peptide PubMed: 23169643

pH-triggered, activated-state conformations of the influenza hemagglutinin fusion peptide revealed by NMR.

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	LEU	PHE	GLY	ALA	ILE	ALA	ALA	PHE	ILE
2	GLU	GLY	GLY	TRP	THR	GLY	MET	ILE	ASP	GLY
3	TRP	TYR	GLY	SER	GLY	LYS	LYS	LYS	LYS	ASP

1	GLY	LEU	PHE	GLY	ALA	ILE	ALA	ALA	PHE	ILE
2	GLU	GLY	GLY	TRP	THR	GLY	MET	ILE	ASP	GLY
3	TRP	TYR	GLY	SER	GLY	LYS	LYS	LYS	LYS	ASP

1	GLY	LEU	PHE	GLY	ALA	ILE	ALA	ALA	PHE	ILE
2	GLU	GLY	GLY	TRP	THR	GLY	MET	ILE	ASP	GLY
3	TRP	TYR	GLY	SER	GLY	LYS	LYS	LYS	LYS	ASP