BMRB Entry 18720
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PDB ID: 2lyd
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18720
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Title: The solution structure of the Dm DCP1 EVH1 domain in complex with the XRN1 DBM peptide PubMed: 23142987
Deposition date: 2012-09-17 Original release date: 2012-10-15
Authors: Truffault, Vincent
Citation: Braun, Joerg; Truffault, Vincent; Boland, Andreas; Huntzinger, Eric; Chang, Chung-Te; Haas, Gabrielle; Weichenrieder, Oliver; Coles, Murray; Izaurralde, Elisa. "A direct interaction between DCP1 and XRN1 couples mRNA decapping to 5' exonucleolytic degradation." Nat. Struct. Mol. Biol. 19, 1324-1331 (2012).
Assembly members:
Dm_DCP1_EVH1_domain, polymer, 133 residues, 15361.304 Da.
XRN1_DBM, polymer, 38 residues, 4355.992 Da.
Natural source: Common Name: Fruit fly Taxonomy ID: 7227 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Drosophila melanogaster
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Dm_DCP1_EVH1_domain: GPHMADLMADESITRMNLAA
IKKIDPYAKEIVDSSSHVAF
YTFNSSQNEWEKTDVEGAFF
IYHRNAEPFHSIFINNRLNT
TSFVEPITGSLELQSQPPFL
LYRNERSRIRGFWFYNSEEC
DRISGLVNGLLKSK
XRN1_DBM: GPQDPLLQQQRAPFPGQMPN
LPKPPLFWQQEAQKQEAL
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 524 |
15N chemical shifts | 123 |
1H chemical shifts | 18 |
Additional metadata:
Related Database Links:
PDB | 2LYD |
GB | AAF47089 AAX94785 ACL88332 ACZ94554 EDV56888 AAF48958 AAK93099 ACZ95330 |
REF | NP_001163282 NP_611842 XP_001976488 XP_002040166 XP_002045212 NP_001162796 NP_523408 |
EMBL | CAB43711 |