BMRB Entry 18840

Name: The ZZ domain of cytoplasmic polyadenylation element binding protein 1 (CPEB1)
Published: 2013-04-01

Click here to enlarge.

PDB ID: 2m13
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR18840
MolProbity Validation Chart

NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry

Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

Select model:

I am color blind

Download raw data. Direct link to this display. Help

Title: The ZZ domain of cytoplasmic polyadenylation element binding protein 1 (CPEB1) PubMed: 23500490

Deposition date: 2012-11-14 Original release date: 2013-04-01

Authors: Lee, Brian; Merkel, Daniel; Wells, Sarah; Hilburn, Bryce; Elazzouzi, Fatima; Perez-Alvarado, Gabriela

Citation: Merkel, Daniel; Wells, Sarah; Hilburn, Bryce; Elazzouzi, Fatima; Perez-Alvarado, Gabriela; Lee, Brian. "The C-Terminal Region of Cytoplasmic Polyadenylation Element Binding Protein Is a ZZ Domain with Potential for Protein-Protein Interactions." J. Mol. Biol. 425, 2015-2026 (2013).

Assembly members:
CPEB1-ZZ_G-P-504-566, polymer, 65 residues, 7768.881 Da.
ZINC ION, non-polymer, 65.409 Da.

Natural source: Common Name: Humans Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
CPEB1-ZZ_G-P-504-566: GPVQIDPYLEDSLCHICSSQ PGPFFCRDQVCFKYFCRSCW HWRHSMEGLRHHSPLMRNQK NRDSS

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
13C chemical shifts	283
15N chemical shifts	76
1H chemical shifts	430

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Entity Assembly ID	Entity Name	Entity ID
1	CPEB1-ZZ_G-P-504-566	1
2	ZINC ION_1	2
3	ZINC ION_2	2

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	ZZ-504	isotropic	sample_conditions_1
2D 1H-15N HSQC	ZZ-498	isotropic	sample_conditions_1
2D 1H-1H NOESY	ZZ-504	isotropic	sample_conditions_1
2D 1H-1H NOESY	ZZ-498	isotropic	sample_conditions_1
2D 1H-13C ct-HSQC aliphatic	ZZ-504	isotropic	sample_conditions_1
2D 1H-13C ct-HSQC aliphatic	ZZ-498	isotropic	sample_conditions_1
2D 1H-13C HMQC aromatic	ZZ-504	isotropic	sample_conditions_1
2D 1H-13C HMQC aromatic	ZZ-498	isotropic	sample_conditions_1
2D 1H-15N HMQC 2JNH	ZZ-498	isotropic	sample_conditions_1
2D (HB)CB(CGCD)HD	ZZ-504	isotropic	sample_conditions_1
3D HNCO	ZZ-504	isotropic	sample_conditions_1
3D HNCO	ZZ-498	isotropic	sample_conditions_1
3D HNCA	ZZ-504	isotropic	sample_conditions_1
3D HNCA	ZZ-498	isotropic	sample_conditions_1
3D HNCACB	ZZ-504	isotropic	sample_conditions_1
3D CBCA(CO)NH	ZZ-504	isotropic	sample_conditions_1
3D CBCA(CO)NH	ZZ-498	isotropic	sample_conditions_1
3D HCCH-COSY	ZZ-504	isotropic	sample_conditions_1
3D HCCH-COSY	ZZ-498	isotropic	sample_conditions_1
3D 1H-15N/13C NOESY	ZZ-504	isotropic	sample_conditions_1
3D 1H-15N/13C NOESY	ZZ-498	isotropic	sample_conditions_1
3D HCCH-TOCSY	ZZ-504	isotropic	sample_conditions_1
3D C(CO)NH	ZZ-504	isotropic	sample_conditions_1

UNP	Q9BZB8
BMRB	19771
PDB	2M13 2MKE
DBJ	BAB14496 BAB33089 BAC37017 BAG63194 BAH11723
EMBL	CAA69588 CAH92427
GB	AAH35348 AAH50629 AAI25477 AAK01239 AAK01240
REF	NP_001073001 NP_001073002 NP_001073003 NP_001099746 NP_001126432
SP	P0C279 P70166 Q5R733 Q9BZB8
TPG	DAA17635

Biological Magnetic Resonance Data Bank

BMRB Entry 18840

Title: The ZZ domain of cytoplasmic polyadenylation element binding protein 1 (CPEB1) PubMed: 23500490

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links: