BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18980

Title: NMR solution structure of HIV-1 nucleocapsid protein in complex with an inhibitor displaying a 2 inhibitors:1 NC stoichiometry   PubMed: 23485336

Deposition date: 2013-01-28 Original release date: 2013-02-21

Authors: Goudreau, Nathalie; Hucke, Oliver

Citation: Goudreau, Nathalie; Hucke, Oliver; Faucher, Anne-Marie; Grand-Maitre, Chantal; Lepage, Olivier; Bonneau, Pierre; Mason, Stephen; Titolo, Steve. "Discovery and structural characterization of a new inhibitor series of HIV-1 nucleocapsid function: NMR solution structure determination of a ternary complex involving a 2:1 inhibitor/NC stoichiometry."  J. Mol. Biol. 425, 1982-1998 (2013).

Assembly members:
entity_1, polymer, 55 residues, 6368.487 Da.
entity_ZN, non-polymer, 65.409 Da.
(3E)-3-{(2Z)-[(5Z)-5-(furan-2-ylmethylidene)-4-oxo-1,3-thiazolidin-2-ylidene]hydrazinylidene}-2-oxo-2,3-dihydro-1H-indole-5-sulfonic acid, non-polymer, 418.404 Da.

Natural source:   Common Name: HIV-1   Taxonomy ID: 11676   Superkingdom: Viruses   Kingdom: not available   Genus/species: Lentivirus HIV-1

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
entity_1: IQKGNFRNQRKTVKCFNCGK EGHIAKNCRAPRKKGCWKCG KEGHQMKDCTERQAN

Data sets:
Data typeCount
13C chemical shifts154
15N chemical shifts61
1H chemical shifts391

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
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Related Database Links:

PDB 1A1T 1F6U 1MFS 2M3Z
DBJ BAC77511 BAC77512 BAF34641 BAO09940
EMBL CBI61180 CBI61183 CBI61184 CBI61185 CBI61186
GB AAA44987 AAB08996 AAB60571 AAB82953 AAB82955
SP P12493 P12497

Download simulated HSQC data in one of the following formats:
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SPARKY: Backbone or all simulated shifts