BMRB Entry 25149

Name: Isolated Ring domain
Published: 2014-10-27

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PDB ID: 2mt5
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full, LACS, SPARTA
BMRB Entry DOI: doi:10.13018/BMR25149
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Nicholas Rego and David Koes
3Dmol.js: molecular visualization with WebGL
Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Isolated Ring domain PubMed: 25306923

Deposition date: 2014-08-13 Original release date: 2014-10-27

Authors: Brown, Nicholas; Watson, Edmond; Weissman, Florian; Royappa, Grace; Schulman, Brenda; Jarvis, Marc; Vanderlinden, Ryan; Frye, Jeremiah; Qiao, Renping; Petzold, Georg; Peters, Jan-Michael; Stark, Holger

Citation: Brown, Nicholas; Watson, Edmond; Weissman, Florian; Royappa, Grace; Jarvis, Marc; Vanderlinden, Ryan; Frye, Jeremiah; Qiao, Renping; Petzold, Georg; Peters, Jan-Michael; Stark, Holger; Schulman, Brenda. "Mechanism of Polyubiquitination by Human Anaphase-Promoting Complex: RING Repurposing for Ubiquitin Chain Assembly" Mol. Cell ., .-. (2014).

Assembly members:
entity_1, polymer, 70 residues, 8191.060 Da.
ZINC ION, non-polymer, 65.409 Da.

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
entity_1: GSVANDENCGICRMAFNGCC PDCKVPGDDCPLVWGQCSHC FHMHCILKWLHAQQVQQHCP MCRQEWKFKE

Data sets:

assigned_chemical_shifts
- assigned_chem_shift_list_1

Data type	Count
1H chemical shifts	469
13C chemical shifts	292
15N chemical shifts	76

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	entity_1	1
2	Zinc Ion 1	2
3	Zinc Ion 2	2
4	Zinc Ion 3	2

1	GLY	SER	VAL	ALA	ASN	ASP	GLU	ASN	CYS	GLY
2	ILE	CYS	ARG	MET	ALA	PHE	ASN	GLY	CYS	CYS
3	PRO	ASP	CYS	LYS	VAL	PRO	GLY	ASP	ASP	CYS
4	PRO	LEU	VAL	TRP	GLY	GLN	CYS	SER	HIS	CYS
5	PHE	HIS	MET	HIS	CYS	ILE	LEU	LYS	TRP	LEU
6	HIS	ALA	GLN	GLN	VAL	GLN	GLN	HIS	CYS	PRO
7	MET	CYS	ARG	GLN	GLU	TRP	LYS	PHE	LYS	GLU

Name	Sample	Sample state	Sample conditions
2D 1H-15N HSQC	sample_1	isotropic	sample_conditions_1
2D 1H-13C HSQC	sample_1	isotropic	sample_conditions_1
3D HNCACB	sample_1	isotropic	sample_conditions_1
3D CBCA(CO)NH	sample_1	isotropic	sample_conditions_1
3D HNCO	sample_1	isotropic	sample_conditions_1
3D HN(CA)CO	sample_1	isotropic	sample_conditions_1

PDB	2MT5 4R2Y 4UI9
DBJ	BAB22663 BAB22890 BAB22937 BAC32348 BAE22944
EMBL	CAH92008
GB	AAF65816 AAH23039 AAH66308 AAH95454 AAI02427
REF	NP_001002245 NP_001002246 NP_001002247 NP_001002248 NP_001002249
SP	Q3ZCF6 Q5R8A2 Q9CPX9 Q9NYG5
TPG	DAA14168 DAA18262

Biological Magnetic Resonance Data Bank

BMRB Entry 25149

Title: Isolated Ring domain PubMed: 25306923

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	SER	VAL	ALA	ASN	ASP	GLU	ASN	CYS	GLY
2	ILE	CYS	ARG	MET	ALA	PHE	ASN	GLY	CYS	CYS
3	PRO	ASP	CYS	LYS	VAL	PRO	GLY	ASP	ASP	CYS
4	PRO	LEU	VAL	TRP	GLY	GLN	CYS	SER	HIS	CYS
5	PHE	HIS	MET	HIS	CYS	ILE	LEU	LYS	TRP	LEU
6	HIS	ALA	GLN	GLN	VAL	GLN	GLN	HIS	CYS	PRO
7	MET	CYS	ARG	GLN	GLU	TRP	LYS	PHE	LYS	GLU

1	GLY	SER	VAL	ALA	ASN	ASP	GLU	ASN	CYS	GLY
2	ILE	CYS	ARG	MET	ALA	PHE	ASN	GLY	CYS	CYS
3	PRO	ASP	CYS	LYS	VAL	PRO	GLY	ASP	ASP	CYS
4	PRO	LEU	VAL	TRP	GLY	GLN	CYS	SER	HIS	CYS
5	PHE	HIS	MET	HIS	CYS	ILE	LEU	LYS	TRP	LEU
6	HIS	ALA	GLN	GLN	VAL	GLN	GLN	HIS	CYS	PRO
7	MET	CYS	ARG	GLN	GLU	TRP	LYS	PHE	LYS	GLU

1	GLY	SER	VAL	ALA	ASN	ASP	GLU	ASN	CYS	GLY
2	ILE	CYS	ARG	MET	ALA	PHE	ASN	GLY	CYS	CYS
3	PRO	ASP	CYS	LYS	VAL	PRO	GLY	ASP	ASP	CYS
4	PRO	LEU	VAL	TRP	GLY	GLN	CYS	SER	HIS	CYS
5	PHE	HIS	MET	HIS	CYS	ILE	LEU	LYS	TRP	LEU
6	HIS	ALA	GLN	GLN	VAL	GLN	GLN	HIS	CYS	PRO
7	MET	CYS	ARG	GLN	GLU	TRP	LYS	PHE	LYS	GLU