BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 25200

Title: 3D structure determination of STARP peptides implicated in P. falciparum invasion of hepatic cells   PubMed: 20580741

Deposition date: 2014-09-04 Original release date: 2014-10-07

Authors: Adriana, Bermudez; Martha, Alba; Magnolia, Vanegas; Manuel E., Patarroyo

Citation: Bermudez, Adriana; Alba, Martha Patricia; Vanegas, Magnolia; Patarroyo, Manuel Elkin. "3D structure determination of STARP peptides implicated in P. falciparum invasion of hepatic cells"  Vaccine 28, 4989-4996 (2010).

Assembly members:
entity, polymer, 20 residues, 2392.855 Da.

Natural source:   Common Name: malaria parasite   Taxonomy ID: 5833   Superkingdom: Eukaryota   Kingdom: not available   Genus/species: Plasmodium falciparum

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
entity: KSMINAYLDKLDLETVRKIH

Data sets:
Data typeCount
1H chemical shifts153

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity1

Entities:

Entity 1, entity 20 residues - 2392.855 Da.

1   LYSSERMETILEASNALATYRLEUASPLYS
2   LEUASPLEUGLUTHRVALARGLYSILEHIS

Samples:

sample_1: entity8 – 9 mM; trifluoroethanol 30%; trifluoroethanol 70%

sample_conditions_1: temperature: 295 K; pH: 3.7; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D DQF-COSYsample_1isotropicsample_conditions_1

Software:

InsightII, Accelrys Software Inc. - geometry optimization, refinement

NMR spectrometers:

  • Bruker DRX 600 MHz

Related Database Links:

PDB
EMBL CAA81224 CAA82996 CAD50796 CDO63500
GB AAF21035 ABZ79507 ABZ79508 ABZ79509 ABZ79510
REF XP_001348958 XP_012762126