BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 25831

Title: solution structure of the complex of microRNA 20b pre-element with Rbfox RRM   PubMed: 27001519

Deposition date: 2015-09-30 Original release date: 2016-04-12

Authors: Yang, Fan; Chen, Yu; Varani, Gabriele

Citation: Chen, Yu; Zubovic, Lorena; Yang, Fan; Godin, Katherine; Pavelitz, Tom; Castellanos, Javier; Macchi, Paolo; Varani, Gabriele. "Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer"  Nucleic Acids Res. 44, 4381-4395 (2016).

Assembly members:
miR-20b, polymer, 23 residues, 7318.388 Da.
Rbfox_RRM, polymer, 104 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: T7 in vitro transcription   Host organism: NA

Entity Sequences (FASTA):
miR-20b: GGUAGUUUUGGCAUGACUCU ACC
Rbfox_RRM: GSHMNTENKSQPKRLHVSNI PFRFRDPDLRQMFGQFGKIL DVEIIFNERGSKGFGFVTFE NSADADRAREKLHGTVVEGR KIEVNNATARVMTNKKTVNP YTNG

Data sets:
Data typeCount
13C chemical shifts566
15N chemical shifts115
1H chemical shifts838

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