BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 30629

Title: Structural Basis for Client Recognition and Activity of Hsp40 Chaperones

Deposition date: 2019-07-09 Original release date: 2019-09-11

Authors: Jiang, Y.; Rossi, P.; Kalodimos, C.

Citation: Jiang, Y.; Rossi, P.; Kalodimos, C.. "Structural Basis for Client Recognition and Activity of Hsp40 Chaperones"  . ., .-..

Assembly members:
entity_1, polymer, 89 residues, 9017.255 Da.

Natural source:   Common Name: E. coli   Taxonomy ID: 83333   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli BL21(DE3)

Entity Sequences (FASTA):
entity_1: METATAGEWQGKGSGGSGGS GGSQDLYATLDVPAPIAVVG GKVRAMTLEGPVEVAVPPRT QAGRKLRLKGKGFPGPAGRG DLYLEVRIT

Data sets:
Data typeCount
13C chemical shifts308
15N chemical shifts65
1H chemical shifts477

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1entity_11

Entities:

Entity 1, entity_1 89 residues - 9017.255 Da.

1   METGLUTHRALATHRALAGLYGLUTRPGLN
2   GLYLYSGLYSERGLYGLYSERGLYGLYSER
3   GLYGLYSERGLNASPLEUTYRALATHRLEU
4   ASPVALPROALAPROILEALAVALVALGLY
5   GLYLYSVALARGALAMETTHRLEUGLUGLY
6   PROVALGLUVALALAVALPROPROARGTHR
7   GLNALAGLYARGLYSLEUARGLEULYSGLY
8   LYSGLYPHEPROGLYPROALAGLYARGGLY
9   ASPLEUTYRLEUGLUVALARGILETHR

Samples:

sample_1: PhoA_235-245_DnaJ_191-256, [U-13C; U-15N], 1 mM; potassium phosphate 20 mM; potassium chloride 75 mM; sodium azide 0.04%

sample_conditions_1: ionic strength: 100 mM; pH: 7.0; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-13C HSQCsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HBHA(CO)NHsample_1isotropicsample_conditions_1
3D CCH-NOESYsample_1isotropicsample_conditions_1
3D CCH_TOCSYsample_1isotropicsample_conditions_1
3D H(CCO)NHsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1
3D 1H-15N NOESYsample_1isotropicsample_conditions_1
3D 1H-13C NOESYsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1

Software:

CNS, Brunger, Adams, Clore, Gros, Nilges and Read - refinement

CYANA, Guntert, Mumenthaler and Wuthrich - structure calculation

PINE, Bahrami, Markley, Assadi, and Eghbalnia - chemical shift assignment

Sparky, Goddard - peak picking

NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

TopSpin v4.0, Bruker Biospin - collection

TALOS, Cornilescu, Delaglio and Bax - geometry optimization

PSVS, Bhattacharya and Montelione - processing

NMR spectrometers:

  • Bruker AVANCE NEO 700 MHz

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts