BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 36086

Title: Solution structure of the major fish allergen parvalbumin Sco j 1 derived from the Pacific mackerel   PubMed: 29215073

Deposition date: 2017-05-22 Original release date: 2017-12-26

Authors: Kumeta, H.; Nakayama, H.; Ogura, K.

Citation: Kumeta, H.; Nakayama, H.; Ogura, K.. "Solution structure of the major fish allergen parvalbumin Sco j 1 derived from the Pacific mackerel"  Sci. Rep. 7, 17160-17160 (2017).

Assembly members:
Parvalbumin beta, polymer, 114 residues, 11973.583 Da.
CALCIUM ION, non-polymer, 40.078 Da.

Natural source:   Common Name: Chub mackerel   Taxonomy ID: 13676   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Scomber japonicus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
Parvalbumin beta: GPLGSMAFASVLKDAEVTAA LDGCKAAGSFDHKKFFKACG LSGKSTDEVKKAFAIIDQDK SGFIEEEELKLFLQNFKAGA RALSDAETKAFLKAGDSDGD GKIGIDEFAAMIKG

Data sets:
Data typeCount
13C chemical shifts458
15N chemical shifts113
1H chemical shifts746

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts