BMRB Entry 4114

Name: Chicken B-MYB DNA Binding Domain, Repeat 2 and Repeat 3
Published: 2001-07-09

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4114

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Chicken B-MYB DNA Binding Domain, Repeat 2 and Repeat 3 PubMed: 9657674

Deposition date: 1998-02-23 Original release date: 2001-07-09

Authors: McIntosh, P.; Carr, M.; Wollborn, U.; Frenkiel, T.; Feeney, J.; McCormick, J.; Klempnauer, K.

Citation: McIntosh, P.; Carr, M.; Wollborn, U.; Frenkiel, T.; Feeney, J.; McCormick, J.; Klempnauer, K.. "Solution Structure of the B-MYB DNA-binding Domain: Evidence for a Key Role for Conformational Instability of the Protein in DNA-binding and Control of Gene Expression" Biochemistry 37, 9619-9629 (1998).

Assembly members:
B-MYB, polymer, 110 residues, Formula weight is not available

Natural source: Common Name: Chicken Taxonomy ID: 9031 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Gallus gallus

Experimental source: Production method: recombinant technology Host organism: Escherichia coli

Entity Sequences (FASTA):
B-MYB: GIPDLVKGPWTKEEDQKVIE LVKKYGTKQWTLIAKHLKGR LGKQCRERWHNHLNPEVKKS SWTEEEDRIIFEAHKVLGNR WAEIAKLLPGRTDNAVKNHW NSTIKRKVDT

Data sets:

assigned_chemical_shifts
- chem_shift_set_1

Data type	Count
13C chemical shifts	348
15N chemical shifts	127
1H chemical shifts	827

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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1	GLY	ILE	PRO	ASP	LEU	VAL	LYS	GLY	PRO	TRP
2	THR	LYS	GLU	GLU	ASP	GLN	LYS	VAL	ILE	GLU
3	LEU	VAL	LYS	LYS	TYR	GLY	THR	LYS	GLN	TRP
4	THR	LEU	ILE	ALA	LYS	HIS	LEU	LYS	GLY	ARG
5	LEU	GLY	LYS	GLN	CYS	ARG	GLU	ARG	TRP	HIS
6	ASN	HIS	LEU	ASN	PRO	GLU	VAL	LYS	LYS	SER
7	SER	TRP	THR	GLU	GLU	GLU	ASP	ARG	ILE	ILE
8	PHE	GLU	ALA	HIS	LYS	VAL	LEU	GLY	ASN	ARG
9	TRP	ALA	GLU	ILE	ALA	LYS	LEU	LEU	PRO	GLY
10	ARG	THR	ASP	ASN	ALA	VAL	LYS	ASN	HIS	TRP
11	ASN	SER	THR	ILE	LYS	ARG	LYS	VAL	ASP	THR

PDB	1A5J
DBJ	BAC25979 BAG37322 BAH13925 BAI46683
EMBL	CAA31655 CAA47839 CAA49898
GB	AAH07585 AAH50842 AAH53555 AAI18124 AAP36828
REF	NP_001068916 NP_001100006 NP_001231398 NP_001252784 NP_001265539
SP	P10244 P48972 Q03237
TPG	DAA23198

Biological Magnetic Resonance Data Bank

BMRB Entry 4114

Title: Chicken B-MYB DNA Binding Domain, Repeat 2 and Repeat 3 PubMed: 9657674

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	GLY	ILE	PRO	ASP	LEU	VAL	LYS	GLY	PRO	TRP
2	THR	LYS	GLU	GLU	ASP	GLN	LYS	VAL	ILE	GLU
3	LEU	VAL	LYS	LYS	TYR	GLY	THR	LYS	GLN	TRP
4	THR	LEU	ILE	ALA	LYS	HIS	LEU	LYS	GLY	ARG
5	LEU	GLY	LYS	GLN	CYS	ARG	GLU	ARG	TRP	HIS
6	ASN	HIS	LEU	ASN	PRO	GLU	VAL	LYS	LYS	SER
7	SER	TRP	THR	GLU	GLU	GLU	ASP	ARG	ILE	ILE
8	PHE	GLU	ALA	HIS	LYS	VAL	LEU	GLY	ASN	ARG
9	TRP	ALA	GLU	ILE	ALA	LYS	LEU	LEU	PRO	GLY
10	ARG	THR	ASP	ASN	ALA	VAL	LYS	ASN	HIS	TRP
11	ASN	SER	THR	ILE	LYS	ARG	LYS	VAL	ASP	THR

Name	Sample	Sample state	Sample conditions
2D DQF-COSY	not available	not available	not available
2D TOCSY	not available	not available	not available
2D NOESY	not available	not available	not available
2D 1H/13C HMQC	not available	not available	not available
2D F2 12C-FILTERED TOCSY	not available	not available	not available
3D 1H/13C HMQC-NOESY	not available	not available	not available
HCCH-COSY	not available	not available	not available
HCCH-TOCSY	not available	not available	not available
3D 1H/15N NOESY-HSQC	not available	not available	not available
NOESY-HMQC	not available	not available	not available
HNHA	not available	not available	not available
HNHB	not available	not available	not available
HMQC-NOESY-HMQC	not available	not available	not available
ROESY-HMQC	not available	not available	not available
TOCSY-HMQC	not available	not available	not available
3D-1H/15N/13C CBCANH	not available	not available	not available
CBCA(CO)NH	not available	not available	not available

1	GLY	ILE	PRO	ASP	LEU	VAL	LYS	GLY	PRO	TRP
2	THR	LYS	GLU	GLU	ASP	GLN	LYS	VAL	ILE	GLU
3	LEU	VAL	LYS	LYS	TYR	GLY	THR	LYS	GLN	TRP
4	THR	LEU	ILE	ALA	LYS	HIS	LEU	LYS	GLY	ARG
5	LEU	GLY	LYS	GLN	CYS	ARG	GLU	ARG	TRP	HIS
6	ASN	HIS	LEU	ASN	PRO	GLU	VAL	LYS	LYS	SER
7	SER	TRP	THR	GLU	GLU	GLU	ASP	ARG	ILE	ILE
8	PHE	GLU	ALA	HIS	LYS	VAL	LEU	GLY	ASN	ARG
9	TRP	ALA	GLU	ILE	ALA	LYS	LEU	LEU	PRO	GLY
10	ARG	THR	ASP	ASN	ALA	VAL	LYS	ASN	HIS	TRP
11	ASN	SER	THR	ILE	LYS	ARG	LYS	VAL	ASP	THR

1	GLY	ILE	PRO	ASP	LEU	VAL	LYS	GLY	PRO	TRP
2	THR	LYS	GLU	GLU	ASP	GLN	LYS	VAL	ILE	GLU
3	LEU	VAL	LYS	LYS	TYR	GLY	THR	LYS	GLN	TRP
4	THR	LEU	ILE	ALA	LYS	HIS	LEU	LYS	GLY	ARG
5	LEU	GLY	LYS	GLN	CYS	ARG	GLU	ARG	TRP	HIS
6	ASN	HIS	LEU	ASN	PRO	GLU	VAL	LYS	LYS	SER
7	SER	TRP	THR	GLU	GLU	GLU	ASP	ARG	ILE	ILE
8	PHE	GLU	ALA	HIS	LYS	VAL	LEU	GLY	ASN	ARG
9	TRP	ALA	GLU	ILE	ALA	LYS	LEU	LEU	PRO	GLY
10	ARG	THR	ASP	ASN	ALA	VAL	LYS	ASN	HIS	TRP
11	ASN	SER	THR	ILE	LYS	ARG	LYS	VAL	ASP	THR