BMRB Entry 4394

Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4394

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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Translation initiation factor IF3 from Escherichia coli Ribosome binding domain (residues 84-180)

Deposition date: 1999-09-09 Original release date: 1999-11-29

Authors: DE COCK, E.; GARCIA, C.; DARDEL, F.

Citation: DE COCK, E.; BLANQUET, S.; LALLEMAND, J.; DARDEL, F.. "INTERACTION OF E. COLI TRANSLATION INITIATION FACTOR IF3 WITH THE RIBOSOME" . ., .-..

Assembly members:
TRANSLATION INITIATION FACTOR IF3, polymer, 100 residues, Formula weight is not available

Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Eubacteria Kingdom: not available Genus/species: ESCHERICHIA COLI

Experimental source: Production method: recombinant technology Host organism: ESCHERICHIA COLI

Entity Sequences (FASTA):
TRANSLATION INITIATION FACTOR IF3: MEFQKKKQKVIQVKEIKFRP GTDEGDYQVKLRSLIRFLEE GDKAKITLRFRGREMAHQQI GMEVLNRVKDDLQELAVVES FPTKIEGRQMIMVLAPKKKQ

Data sets:

assigned_chemical_shifts
- chem_shift_set_1

Data type	Count
13C chemical shifts	256
15N chemical shifts	92
1H chemical shifts	637

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	IF3 ribosome binding domain	1

Name	Sample	Sample state	Sample conditions
3D 1H-13C-1H HCCH-TOCSY	not available	not available	sample_cond_1
3D HNCA	not available	not available	sample_cond_1
3D HNHB	not available	not available	sample_cond_1
3D 1H-1H-15N NOESY	not available	not available	sample_cond_1
3D 13C-1H-1H NOESY	not available	not available	sample_cond_1

Related Database Links:

PDB	2IFE
DBJ	BAA15485 BAB35848 BAG66478 BAG77410 BAH63902
EMBL	CAA23561 CAD02019 CAP76214 CAQ32193 CAR33292
GB	AAA51467 AAC36811 AAC36814 AAC74788 AAG56705
PIR	AB0706 E85780
REF	NP_310452 NP_416233 NP_456178 NP_460300 NP_707396
SP	B1IPL0 B7USA1 C4ZYI0 P0A707 P0A708

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts

1	MET	GLU	PHE	GLN	LYS	LYS	LYS	GLN	LYS	VAL
2	ILE	GLN	VAL	LYS	GLU	ILE	LYS	PHE	ARG	PRO
3	GLY	THR	ASP	GLU	GLY	ASP	TYR	GLN	VAL	LYS
4	LEU	ARG	SER	LEU	ILE	ARG	PHE	LEU	GLU	GLU
5	GLY	ASP	LYS	ALA	LYS	ILE	THR	LEU	ARG	PHE
6	ARG	GLY	ARG	GLU	MET	ALA	HIS	GLN	GLN	ILE
7	GLY	MET	GLU	VAL	LEU	ASN	ARG	VAL	LYS	ASP
8	ASP	LEU	GLN	GLU	LEU	ALA	VAL	VAL	GLU	SER
9	PHE	PRO	THR	LYS	ILE	GLU	GLY	ARG	GLN	MET
10	ILE	MET	VAL	LEU	ALA	PRO	LYS	LYS	LYS	GLN

Biological Magnetic Resonance Data Bank

BMRB Entry 4394

Title: Translation initiation factor IF3 from Escherichia coli Ribosome binding domain (residues 84-180)

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

1	MET	GLU	PHE	GLN	LYS	LYS	LYS	GLN	LYS	VAL
2	ILE	GLN	VAL	LYS	GLU	ILE	LYS	PHE	ARG	PRO
3	GLY	THR	ASP	GLU	GLY	ASP	TYR	GLN	VAL	LYS
4	LEU	ARG	SER	LEU	ILE	ARG	PHE	LEU	GLU	GLU
5	GLY	ASP	LYS	ALA	LYS	ILE	THR	LEU	ARG	PHE
6	ARG	GLY	ARG	GLU	MET	ALA	HIS	GLN	GLN	ILE
7	GLY	MET	GLU	VAL	LEU	ASN	ARG	VAL	LYS	ASP
8	ASP	LEU	GLN	GLU	LEU	ALA	VAL	VAL	GLU	SER
9	PHE	PRO	THR	LYS	ILE	GLU	GLY	ARG	GLN	MET
10	ILE	MET	VAL	LEU	ALA	PRO	LYS	LYS	LYS	GLN

1	MET	GLU	PHE	GLN	LYS	LYS	LYS	GLN	LYS	VAL
2	ILE	GLN	VAL	LYS	GLU	ILE	LYS	PHE	ARG	PRO
3	GLY	THR	ASP	GLU	GLY	ASP	TYR	GLN	VAL	LYS
4	LEU	ARG	SER	LEU	ILE	ARG	PHE	LEU	GLU	GLU
5	GLY	ASP	LYS	ALA	LYS	ILE	THR	LEU	ARG	PHE
6	ARG	GLY	ARG	GLU	MET	ALA	HIS	GLN	GLN	ILE
7	GLY	MET	GLU	VAL	LEU	ASN	ARG	VAL	LYS	ASP
8	ASP	LEU	GLN	GLU	LEU	ALA	VAL	VAL	GLU	SER
9	PHE	PRO	THR	LYS	ILE	GLU	GLY	ARG	GLN	MET
10	ILE	MET	VAL	LEU	ALA	PRO	LYS	LYS	LYS	GLN

1	MET	GLU	PHE	GLN	LYS	LYS	LYS	GLN	LYS	VAL
2	ILE	GLN	VAL	LYS	GLU	ILE	LYS	PHE	ARG	PRO
3	GLY	THR	ASP	GLU	GLY	ASP	TYR	GLN	VAL	LYS
4	LEU	ARG	SER	LEU	ILE	ARG	PHE	LEU	GLU	GLU
5	GLY	ASP	LYS	ALA	LYS	ILE	THR	LEU	ARG	PHE
6	ARG	GLY	ARG	GLU	MET	ALA	HIS	GLN	GLN	ILE
7	GLY	MET	GLU	VAL	LEU	ASN	ARG	VAL	LYS	ASP
8	ASP	LEU	GLN	GLU	LEU	ALA	VAL	VAL	GLU	SER
9	PHE	PRO	THR	LYS	ILE	GLU	GLY	ARG	GLN	MET
10	ILE	MET	VAL	LEU	ALA	PRO	LYS	LYS	LYS	GLN