BMRB Entry 5668

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR5668

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Backbone and side chain 1H, 13C, and 15N chemical shift assignments for Zinc-containing 3-methyladenine DNA glycosylase I (TAG) from Escherichia coli PubMed: 12654914

Deposition date: 2003-01-23 Original release date: 2003-10-08

Authors: Stivers, James; Drohat, Alexander; Cao, Chunyang

Citation: Kwon, Keehwan; Cao, Chunyang; Stivers, James. "A Novel Zinc Snap Motif Conveys Structural Stability to 3-Methyladenine DNA Glycosylase I " J. Biol. Chem. 278, 19442-19446 (2003).

Assembly members:
3-methyladenine DNA glycosylase I, polymer, 187 residues, 21114 Da.
ZN, non-polymer, 65.409 Da.

Natural source: Common Name: E. Coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):
3-methyladenine DNA glycosylase I: MERCGWVSQDPLYIAYHDNE WGVPETDSKKLFEMICLEGQ QAGLSWITVLKKRENYRACF HQFDPVKVAAMQEEDVERLV QDAGIIRHRGKIQAIIGNAR AYLQMEQNGEPFADFVWSFV NHQPQMTQATTLSEIPTSTP ASDALSKALKKRGFKFVGTT ICYSFMQACGLVNDHVVGCC CYPGNKP

Data sets:

assigned_chemical_shifts
- 1

Data type	Count
1H chemical shifts	1242
13C chemical shifts	786
15N chemical shifts	193

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	3-methyladenine DNA glycosylase I	1
2	Zinc ion (II)	2

BMRB	5398
PDB	1LMZ 1NKU 1P7M
DBJ	BAB37857 BAE77746 BAG79346 BAI28206 BAI33380
EMBL	CAA27472 CAP78009 CAQ33867 CAR00511 CAR05177
GB	AAA24658 AAB18526 AAC76573 AAG58698 AAN82803
REF	NP_290134 NP_312461 NP_418005 NP_756229 WP_000438929
SP	P05100

Biological Magnetic Resonance Data Bank

BMRB Entry 5668

Title: Backbone and side chain 1H, 13C, and 15N chemical shift assignments for Zinc-containing 3-methyladenine DNA glycosylase I (TAG) from Escherichia coli PubMed: 12654914

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

Related Database Links:

Name	Sample	Sample state	Sample conditions
13C-edited HSQC	not available	not available	sample_condition_1
15N-edited HSQC	not available	not available	sample_condition_1
2D NOESY (t = 125 ms) in D2O	not available	not available	sample_condition_1
2D TOCSY in D2O	not available	not available	sample_condition_1
HNCA	not available	not available	sample_condition_1
HNCO	not available	not available	sample_condition_1
HCACO	not available	not available	sample_condition_1
HNCACB	not available	not available	sample_condition_1
CBCA(CO)NH	not available	not available	sample_condition_1
HBHA(CO)NH	not available	not available	sample_condition_1
HCCH-TOCSY	not available	not available	sample_condition_1
HCCH-COSY	not available	not available	sample_condition_1
15N-edited TOCSY	not available	not available	sample_condition_1
15N-edited NOESY (t = 125 ms)	not available	not available	sample_condition_1
13C-edited NOESY aliphatic (t = 125 ms)	not available	not available	sample_condition_1
13C-edited NOESY aromatic (t = 125 ms)	not available	not available	sample_condition_1
4D 13C,13C-edited NOESY (t = 100 ms)	not available	not available	sample_condition_1
2D 1H, 15N LR-HSQC	not available	not available	sample_condition_1