BMRB Entry 5903

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PDB ID: 2i83
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5903
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: 1H,13C and 15N backbone resonance assignment of the Hyaluronan-binding domain of CD44 PubMed: 15017146

Deposition date: 2003-08-15 Original release date: 2004-04-07

Authors: Takeda, Mitsuhiro; Terasawa, Hiroaki; Sakakura, Masayosh; Yamaguchi, Yoshiki; Kajiwara, Masahiro; Kawashima, Hiroto; Miyasaka, Masayuki; Shimada, Ichio

Citation: Takeda, Mitsuhiro; Terasawa, Hiroaki; Sakakura, Masayoshi; Yamaguchi, Yoshiki; Kajiwara, Masahiro; Kawashima, Hiroto; Miyasaka, Masayuki; Shimada, Ichio. "Letter to the Editor: 1H, 13C and 15N backbone resonance assignments of the Hyaluronan-binding domain of CD44" J. Biomol. NMR 29, 97-98 (2004).

Assembly members:
CD44 hyaluronan-binding domain, polymer, 160 residues, Formula weight is not available

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):
CD44 hyaluronan-binding domain: MAQIDLNITCRFAGVFHVEK NGRYSISRTEAADLCKAFNS TLPTMAQMEKALSIGFETCR YGFIEGHVVIPRIHPNSICA ANNTGVYILTSNTSQYDTYC FNASAPPEEDCTSVTDLPNA FDGPITITIVNRDGTRYVQK GEYRTNPEDIYPSNPTDDDV

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
13C chemical shifts	284
15N chemical shifts	144
1H chemical shifts	144

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
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Entity Assembly ID	Entity Name	Entity ID
1	CD44 hyaluronan binding domain	1

Name	Sample	Sample state	Sample conditions
1H-15N HSQC	not available	not available	not available
3D HNCA	not available	not available	not available
3D HN(CO)CA	not available	not available	not available
3D HNCACB	not available	not available	not available
3D CBCA(CO)NH	not available	not available	not available

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts

1	MET	ALA	GLN	ILE	ASP	LEU	ASN	ILE	THR	CYS
2	ARG	PHE	ALA	GLY	VAL	PHE	HIS	VAL	GLU	LYS
3	ASN	GLY	ARG	TYR	SER	ILE	SER	ARG	THR	GLU
4	ALA	ALA	ASP	LEU	CYS	LYS	ALA	PHE	ASN	SER
5	THR	LEU	PRO	THR	MET	ALA	GLN	MET	GLU	LYS
6	ALA	LEU	SER	ILE	GLY	PHE	GLU	THR	CYS	ARG
7	TYR	GLY	PHE	ILE	GLU	GLY	HIS	VAL	VAL	ILE
8	PRO	ARG	ILE	HIS	PRO	ASN	SER	ILE	CYS	ALA
9	ALA	ASN	ASN	THR	GLY	VAL	TYR	ILE	LEU	THR
10	SER	ASN	THR	SER	GLN	TYR	ASP	THR	TYR	CYS
11	PHE	ASN	ALA	SER	ALA	PRO	PRO	GLU	GLU	ASP
12	CYS	THR	SER	VAL	THR	ASP	LEU	PRO	ASN	ALA
13	PHE	ASP	GLY	PRO	ILE	THR	ILE	THR	ILE	VAL
14	ASN	ARG	ASP	GLY	THR	ARG	TYR	VAL	GLN	LYS
15	GLY	GLU	TYR	ARG	THR	ASN	PRO	GLU	ASP	ILE
16	TYR	PRO	SER	ASN	PRO	THR	ASP	ASP	ASP	VAL

Biological Magnetic Resonance Data Bank

BMRB Entry 5903

Title: 1H,13C and 15N backbone resonance assignment of the Hyaluronan-binding domain of CD44 PubMed: 15017146

Additional metadata:

Assembly:

Entities:

Samples:

Experiments:

Software:

NMR spectrometers:

1	MET	ALA	GLN	ILE	ASP	LEU	ASN	ILE	THR	CYS
2	ARG	PHE	ALA	GLY	VAL	PHE	HIS	VAL	GLU	LYS
3	ASN	GLY	ARG	TYR	SER	ILE	SER	ARG	THR	GLU
4	ALA	ALA	ASP	LEU	CYS	LYS	ALA	PHE	ASN	SER
5	THR	LEU	PRO	THR	MET	ALA	GLN	MET	GLU	LYS
6	ALA	LEU	SER	ILE	GLY	PHE	GLU	THR	CYS	ARG
7	TYR	GLY	PHE	ILE	GLU	GLY	HIS	VAL	VAL	ILE
8	PRO	ARG	ILE	HIS	PRO	ASN	SER	ILE	CYS	ALA
9	ALA	ASN	ASN	THR	GLY	VAL	TYR	ILE	LEU	THR
10	SER	ASN	THR	SER	GLN	TYR	ASP	THR	TYR	CYS
11	PHE	ASN	ALA	SER	ALA	PRO	PRO	GLU	GLU	ASP
12	CYS	THR	SER	VAL	THR	ASP	LEU	PRO	ASN	ALA
13	PHE	ASP	GLY	PRO	ILE	THR	ILE	THR	ILE	VAL
14	ASN	ARG	ASP	GLY	THR	ARG	TYR	VAL	GLN	LYS
15	GLY	GLU	TYR	ARG	THR	ASN	PRO	GLU	ASP	ILE
16	TYR	PRO	SER	ASN	PRO	THR	ASP	ASP	ASP	VAL

1	MET	ALA	GLN	ILE	ASP	LEU	ASN	ILE	THR	CYS
2	ARG	PHE	ALA	GLY	VAL	PHE	HIS	VAL	GLU	LYS
3	ASN	GLY	ARG	TYR	SER	ILE	SER	ARG	THR	GLU
4	ALA	ALA	ASP	LEU	CYS	LYS	ALA	PHE	ASN	SER
5	THR	LEU	PRO	THR	MET	ALA	GLN	MET	GLU	LYS
6	ALA	LEU	SER	ILE	GLY	PHE	GLU	THR	CYS	ARG
7	TYR	GLY	PHE	ILE	GLU	GLY	HIS	VAL	VAL	ILE
8	PRO	ARG	ILE	HIS	PRO	ASN	SER	ILE	CYS	ALA
9	ALA	ASN	ASN	THR	GLY	VAL	TYR	ILE	LEU	THR
10	SER	ASN	THR	SER	GLN	TYR	ASP	THR	TYR	CYS
11	PHE	ASN	ALA	SER	ALA	PRO	PRO	GLU	GLU	ASP
12	CYS	THR	SER	VAL	THR	ASP	LEU	PRO	ASN	ALA
13	PHE	ASP	GLY	PRO	ILE	THR	ILE	THR	ILE	VAL
14	ASN	ARG	ASP	GLY	THR	ARG	TYR	VAL	GLN	LYS
15	GLY	GLU	TYR	ARG	THR	ASN	PRO	GLU	ASP	ILE
16	TYR	PRO	SER	ASN	PRO	THR	ASP	ASP	ASP	VAL

1	MET	ALA	GLN	ILE	ASP	LEU	ASN	ILE	THR	CYS
2	ARG	PHE	ALA	GLY	VAL	PHE	HIS	VAL	GLU	LYS
3	ASN	GLY	ARG	TYR	SER	ILE	SER	ARG	THR	GLU
4	ALA	ALA	ASP	LEU	CYS	LYS	ALA	PHE	ASN	SER
5	THR	LEU	PRO	THR	MET	ALA	GLN	MET	GLU	LYS
6	ALA	LEU	SER	ILE	GLY	PHE	GLU	THR	CYS	ARG
7	TYR	GLY	PHE	ILE	GLU	GLY	HIS	VAL	VAL	ILE
8	PRO	ARG	ILE	HIS	PRO	ASN	SER	ILE	CYS	ALA
9	ALA	ASN	ASN	THR	GLY	VAL	TYR	ILE	LEU	THR
10	SER	ASN	THR	SER	GLN	TYR	ASP	THR	TYR	CYS
11	PHE	ASN	ALA	SER	ALA	PRO	PRO	GLU	GLU	ASP
12	CYS	THR	SER	VAL	THR	ASP	LEU	PRO	ASN	ALA
13	PHE	ASP	GLY	PRO	ILE	THR	ILE	THR	ILE	VAL
14	ASN	ARG	ASP	GLY	THR	ARG	TYR	VAL	GLN	LYS
15	GLY	GLU	TYR	ARG	THR	ASN	PRO	GLU	ASP	ILE
16	TYR	PRO	SER	ASN	PRO	THR	ASP	ASP	ASP	VAL