BMRB Entry 5980
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR5980
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Structure Function Analysis of the Stemp Loop IIIc of HCV and GBV-B IRES PubMed: 15476802
Deposition date: 2003-10-22 Original release date: 2004-11-08
Authors: Thiviyanathan, Varatharasa
Citation: Rijnbrand, R.; Thiviyanathan, Varatharasa; Kaluarachchi, K.; Lemon, S.; Gorenstein, D.. "Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites." J. Mol. Biol. 343, 805-817 (2004).
Assembly members:
Ribo Nucleic Acid, polymer, 10 residues, Formula weight is not available
Natural source: Common Name: not available Taxonomy ID: not available Superkingdom: viruses Kingdom: not available Genus/species: GB Virus B
Experimental source: Production method: enzymatic semisynthesis
Entity Sequences (FASTA):
Ribo Nucleic Acid: GGGCAAGCCC
- assigned_chemical_shifts
Data type | Count |
1H chemical shifts | 71 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | IIIc, monomer | 1 |
Entities:
Entity 1, IIIc, monomer 10 residues - Formula weight is not available
1 | G | G | G | C | A | A | G | C | C | C |
Samples:
sample_1: Ribo Nucleic Acid0.2 0.8 mM
conidtion_1: pH: 6.8; temperature: 298 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D NOESY, | not available | not available | not available |
2D TOCSY | not available | not available | not available |
1H-31P HETRO TOCSY | not available | not available | not available |
DQF-COSY | not available | not available | not available |
Software:
FELIX v97 - peak assignemnt
NMR spectrometers:
- Varian UnityPlus 600 MHz
- Varian UnityPlus 750 MHz